Sycp1 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Sycp1
synaptonemal complex protein 1
MGI:105931

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0003690	double-stranded DNA binding	ISO	J:164563
Molecular Function	GO:0003690	double-stranded DNA binding	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:99196
Molecular Function	GO:0005515	protein binding	IPI	J:277855
Molecular Function	GO:0005515	protein binding	IPI	J:285969
Molecular Function	GO:0005515	protein binding	IPI	J:113188
Cellular Component	GO:0030849	autosome	IDA	J:239544
Cellular Component	GO:0000801	central element	IBA	J:265628
Cellular Component	GO:0000801	central element	IDA	J:194119
Cellular Component	GO:0000801	central element	IDA	J:82597
Cellular Component	GO:0005694	chromosome	IDA	J:285969
Cellular Component	GO:0005694	chromosome	IDA	J:268520
Cellular Component	GO:0005694	chromosome	IDA	J:297328
Cellular Component	GO:0005694	chromosome	IDA	J:113188
Cellular Component	GO:0005694	chromosome	IDA	J:63364
Cellular Component	GO:0000775	chromosome, centromeric region	IEA	J:60000
Cellular Component	GO:0000794	condensed nuclear chromosome	IDA	J:215796
Cellular Component	GO:0000794	condensed nuclear chromosome	IDA	J:187588
Cellular Component	GO:0000794	condensed nuclear chromosome	IDA	J:209347
Cellular Component	GO:0000794	condensed nuclear chromosome	IDA	J:199766
Cellular Component	GO:0000800	lateral element	TAS	J:99196
Cellular Component	GO:0001673	male germ cell nucleus	IBA	J:265628
Cellular Component	GO:0001673	male germ cell nucleus	IDA	J:123677
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-912506
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0000795	synaptonemal complex	ISO	J:155856
Cellular Component	GO:0000795	synaptonemal complex	IMP	J:98718
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:237199
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:182054
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:227337
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:123677
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:270644
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:236226
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:113188
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:224007
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:130361
Cellular Component	GO:0000795	synaptonemal complex	ISS	J:113188
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:238859
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:83946
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:161203
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:131722
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:130361
Cellular Component	GO:0000795	synaptonemal complex	IDA	J:226405
Cellular Component	GO:0000802	transverse filament	ISO	J:155856
Cellular Component	GO:0000802	transverse filament	IBA	J:265628
Cellular Component	GO:0000802	transverse filament	IDA	J:173639
Cellular Component	GO:0000802	transverse filament	IDA	J:135578
Cellular Component	GO:0000802	transverse filament	IDA	J:98372
Cellular Component	GO:0000802	transverse filament	IDA	J:185266
Biological Process	GO:0007049	cell cycle	IEA	J:60000
Biological Process	GO:0051301	cell division	IEA	J:60000
Biological Process	GO:0051026	chiasma assembly	IBA	J:265628
Biological Process	GO:0051026	chiasma assembly	IGI	J:182264
Biological Process	GO:0007129	homologous chromosome pairing at meiosis	IMP	J:98718
Biological Process	GO:0051878	lateral element assembly	IBA	J:265628
Biological Process	GO:0051878	lateral element assembly	IGI	J:182264
Biological Process	GO:0051321	meiotic cell cycle	IEA	J:60000
Biological Process	GO:0000711	meiotic DNA repair synthesis	IBA	J:265628
Biological Process	GO:0000711	meiotic DNA repair synthesis	IMP	J:182264
Biological Process	GO:0000711	meiotic DNA repair synthesis	IGI	J:182264
Biological Process	GO:0051289	protein homotetramerization	ISO	J:164563
Biological Process	GO:0007131	reciprocal meiotic recombination	IMP	J:98718
Biological Process	GO:0032880	regulation of protein localization	IMP	J:113188
Biological Process	GO:0035092	sperm DNA condensation	IGI	J:182264
Biological Process	GO:0007283	spermatogenesis	IGI	J:182264
Biological Process	GO:0007130	synaptonemal complex assembly	IMP	J:98718
Biological Process	GO:0007130	synaptonemal complex assembly	IDA	J:99196
Biological Process	GO:0007130	synaptonemal complex assembly	IGI	J:182264
Biological Process	GO:0007130	synaptonemal complex assembly	IGI	J:182264
Biological Process	GO:0007130	synaptonemal complex assembly	IMP	J:182264

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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