GO Annotations Graph

• Symbol: Alx4
• Name: aristaless-like homeobox 4
• ID: MGI:108359

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:72247
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IDA	J:51128
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:51128
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:73689
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:50255
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA	J:72247
Molecular Function	GO:0071837	HMG box domain binding	IPI	J:175179
Molecular Function	GO:0005515	protein binding	IPI	J:51128
Molecular Function	GO:0005515	protein binding	IPI	J:50255
Molecular Function	GO:0005515	protein binding	IPI	J:73689
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IDA	J:51128
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0043565	sequence-specific DNA binding	IDA	J:50255
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:43769
Cellular Component	GO:0005634	nucleus	IDA	J:50255
Cellular Component	GO:0005667	transcription regulator complex	IPI	J:73689
Cellular Component	GO:0005667	transcription regulator complex	IDA	J:51128
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:51128
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:43769
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:51128
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:51128
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:51128
Biological Process	GO:0048565	digestive tract development	IMP	J:42445
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:42455
Biological Process	GO:0042733	embryonic digit morphogenesis	IMP	J:42445
Biological Process	GO:0035115	embryonic forelimb morphogenesis	IGI	J:71880
Biological Process	GO:0035116	embryonic hindlimb morphogenesis	IGI	J:71880
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IMP	J:101708
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IGI	J:71880
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IGI	J:51128
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IGI	J:101708
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IGI	J:101708
Biological Process	GO:0001942	hair follicle development	ISO	J:164563
Biological Process	GO:0035108	limb morphogenesis	IMP	J:51128
Biological Process	GO:0035108	limb morphogenesis	IMP	J:43769
Biological Process	GO:0035108	limb morphogenesis	IGI	J:51128
Biological Process	GO:0007275	multicellular organism development	IEA	J:72247
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0007517	muscle organ development	IMP	J:43769
Biological Process	GO:0007389	pattern specification process	IGI	J:71880
Biological Process	GO:0007389	pattern specification process	IGI	J:71880
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:51128
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:51128
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:50255
Biological Process	GO:0009791	post-embryonic development	IMP	J:42445
Biological Process	GO:0042981	regulation of apoptotic process	IGI	J:71880
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IDA	J:73689
Biological Process	GO:0060021	roof of mouth development	IGI	J:51128
Biological Process	GO:0048705	skeletal system morphogenesis	IMP	J:43769