GO Annotations Graph

• Symbol: Ctr9
• Name: CTR9 homolog, Paf1/RNA polymerase II complex component
• ID: MGI:109345

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0005515	protein binding	IPI	J:283190
Molecular Function	GO:0005515	protein binding	IPI	J:237500
Molecular Function	GO:0005515	protein binding	IPI	J:32101
Molecular Function	GO:0000993	RNA polymerase II complex binding	IBA	J:265628
Molecular Function	GO:0042169	SH2 domain binding	IDA	J:32101
Cellular Component	GO:0016593	Cdc73/Paf1 complex	IPI	J:283190
Cellular Component	GO:0016593	Cdc73/Paf1 complex	ISO	J:164563
Cellular Component	GO:0016593	Cdc73/Paf1 complex	IBA	J:265628
Cellular Component	GO:0000791	euchromatin	IDA	J:149841
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:32101
Cellular Component	GO:0005634	nucleus	IDA	J:203796
Biological Process	GO:0001832	blastocyst growth	IMP	J:203796
Biological Process	GO:0001832	blastocyst growth	IGI	J:203796
Biological Process	GO:0001835	blastocyst hatching	IMP	J:244597
Biological Process	GO:0071222	cellular response to lipopolysaccharide	IDA	J:183965
Biological Process	GO:0001711	endodermal cell fate commitment	IMP	J:149841
Biological Process	GO:0080182	histone H3-K4 trimethylation	ISO	J:164563
Biological Process	GO:0016570	histone modification	IEA	J:72247
Biological Process	GO:0001826	inner cell mass cell differentiation	IMP	J:203796
Biological Process	GO:0070102	interleukin-6-mediated signaling pathway	IMP	J:183965
Biological Process	GO:0045638	negative regulation of myeloid cell differentiation	ISO	J:164563
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IMP	J:149841
Biological Process	GO:0051571	positive regulation of histone H3-K4 methylation	ISO	J:164563
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0007259	receptor signaling pathway via JAK-STAT	IMP	J:183965
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:2000653	regulation of genetic imprinting	IMP	J:203796
Biological Process	GO:0051569	regulation of histone H3-K4 methylation	IBA	J:265628
Biological Process	GO:0019827	stem cell population maintenance	IMP	J:149841
Biological Process	GO:0019827	stem cell population maintenance	ISO	J:164563
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	IBA	J:265628
Biological Process	GO:0001829	trophectodermal cell differentiation	IMP	J:203796
Biological Process	GO:0016055	Wnt signaling pathway	IEA	J:60000