GO Annotations Graph

• Symbol: Nup98
• Name: nucleoporin 98
• ID: MGI:109404

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0016787	hydrolase activity	IEA	J:60000
Molecular Function	GO:0003729	mRNA binding	ISO	J:164563
Molecular Function	GO:0008139	nuclear localization sequence binding	ISO	J:155856
Molecular Function	GO:0008139	nuclear localization sequence binding	IBA	J:265628
Molecular Function	GO:0008233	peptidase activity	IEA	J:60000
Molecular Function	GO:0042277	peptide binding	ISO	J:155856
Molecular Function	GO:1990841	promoter-specific chromatin binding	ISO	J:164563
Molecular Function	GO:0003723	RNA binding	IBA	J:265628
Molecular Function	GO:0008236	serine-type peptidase activity	IEA	J:60000
Molecular Function	GO:0017056	structural constituent of nuclear pore	ISO	J:164563
Molecular Function	GO:0017056	structural constituent of nuclear pore	IBA	J:265628
Molecular Function	GO:0003713	transcription coactivator activity	ISO	J:164563
Cellular Component	GO:0000776	kinetochore	ISO	J:164563
Cellular Component	GO:0016020	membrane	IEA	J:60000
Cellular Component	GO:0016604	nuclear body	ISO	J:164563
Cellular Component	GO:0005635	nuclear envelope	ISO	J:164563
Cellular Component	GO:0005635	nuclear envelope	ISO	J:164563
Cellular Component	GO:0042405	nuclear inclusion body	ISO	J:155856
Cellular Component	GO:0042405	nuclear inclusion body	ISO	J:164563
Cellular Component	GO:0031965	nuclear membrane	ISO	J:155856
Cellular Component	GO:0031965	nuclear membrane	ISO	J:164563
Cellular Component	GO:0034399	nuclear periphery	ISO	J:164563
Cellular Component	GO:0034399	nuclear periphery	ISO	J:155856
Cellular Component	GO:0005643	nuclear pore	ISO	J:164563
Cellular Component	GO:0005643	nuclear pore	ISO	J:155856
Cellular Component	GO:0005643	nuclear pore	NAS	J:320054
Cellular Component	GO:0044614	nuclear pore cytoplasmic filaments	IBA	J:265628
Cellular Component	GO:0044615	nuclear pore nuclear basket	ISO	J:164563
Cellular Component	GO:0044615	nuclear pore nuclear basket	ISO	J:155856
Cellular Component	GO:0031080	nuclear pore outer ring	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:155856
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:94966
Cellular Component	GO:1990904	ribonucleoprotein complex	ISO	J:164563
Biological Process	GO:0051028	mRNA transport	IEA	J:60000
Biological Process	GO:0051292	nuclear pore complex assembly	ISO	J:164563
Biological Process	GO:0006913	nucleocytoplasmic transport	NAS	J:320054
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	ISO	J:164563
Biological Process	GO:0000973	post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery	IBA	J:265628
Biological Process	GO:0006606	protein import into nucleus	ISO	J:155856
Biological Process	GO:0006606	protein import into nucleus	IBA	J:265628
Biological Process	GO:0015031	protein transport	IEA	J:60000
Biological Process	GO:0006508	proteolysis	IEA	J:60000
Biological Process	GO:0006405	RNA export from nucleus	IBA	J:265628
Biological Process	GO:0034398	telomere tethering at nuclear periphery	IBA	J:265628