Synpo GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Synpo
synaptopodin
MGI:1099446

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003779	actin binding	IBA	J:265628
Molecular Function	GO:0003779	actin binding	IDA	J:43510
Cellular Component	GO:0015629	actin cytoskeleton	ISO	J:164563
Cellular Component	GO:0015629	actin cytoskeleton	IBA	J:265628
Cellular Component	GO:0015629	actin cytoskeleton	IDA	J:43510
Cellular Component	GO:0005923	bicellular tight junction	IEA	J:60000
Cellular Component	GO:0030054	cell junction	IEA	J:60000
Cellular Component	GO:0071944	cell periphery	IDA	J:276466
Cellular Component	GO:0042995	cell projection	IEA	J:60000
Cellular Component	GO:0005737	cytoplasm	IEA	J:60000
Cellular Component	GO:0005856	cytoskeleton	IEA	J:60000
Cellular Component	GO:0005829	cytosol	ISO	J:164563
Cellular Component	GO:0030425	dendrite	ISO	J:43510
Cellular Component	GO:0043197	dendritic spine	NAS	J:98090
Cellular Component	GO:0098978	glutamatergic synapse	ISO	J:155856
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:85310
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:85310
Cellular Component	GO:0098978	glutamatergic synapse	IMP	J:85310
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IMP	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IMP	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:216149
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005886	plasma membrane	ISO	J:164563
Cellular Component	GO:0098794	postsynapse	IDA	J:216149
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	IDA	J:85310
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	IDA	J:85310
Cellular Component	GO:0098685	Schaffer collateral - CA1 synapse	IMP	J:85310
Cellular Component	GO:0097444	spine apparatus	ISO	J:155856
Cellular Component	GO:0097444	spine apparatus	IDA	J:85310
Cellular Component	GO:0097444	spine apparatus	IBA	J:265628
Cellular Component	GO:0001725	stress fiber	IDA	J:98090
Cellular Component	GO:0001725	stress fiber	IBA	J:265628
Cellular Component	GO:0045202	synapse	IEA	J:60000
Cellular Component	GO:0030018	Z disc	IBA	J:265628
Biological Process	GO:0030865	cortical cytoskeleton organization	NAS	J:98090
Biological Process	GO:0098886	modification of dendritic spine	ISO	J:164563
Biological Process	GO:0098886	modification of dendritic spine	IBA	J:265628
Biological Process	GO:0032233	positive regulation of actin filament bundle assembly	IDA	J:98090
Biological Process	GO:0032233	positive regulation of actin filament bundle assembly	IBA	J:265628
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IMP	J:85310
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:85310
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:85310
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IMP	J:85310
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:85310
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:85310
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:216149
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:216149
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:216149
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:216149
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IMP	J:216149
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:216149
Biological Process	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IDA	J:216149
Biological Process	GO:0048169	regulation of long-term neuronal synaptic plasticity	IMP	J:85310
Biological Process	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	IDA	J:216149
Biological Process	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	IDA	J:216149
Biological Process	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	IDA	J:216149
Biological Process	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	IMP	J:216149
Biological Process	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	IDA	J:216149
Biological Process	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	IDA	J:216149
Biological Process	GO:0099566	regulation of postsynaptic cytosolic calcium ion concentration	IDA	J:216149
Biological Process	GO:0051492	regulation of stress fiber assembly	IDA	J:98090
Biological Process	GO:1905355	spine apparatus assembly	IMP	J:85310
Biological Process	GO:1905355	spine apparatus assembly	IBA	J:265628
Biological Process	GO:0008542	visual learning	IMP	J:85310

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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