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GO Annotations Graph
Symbol
Name
ID
Ercc6
excision repair cross-complementing rodent repair deficiency, complementation group 6
MGI:1100494

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.


Gene Ontology Evidence Code Abbreviations:

Experimental:
EXP
Inferred from experiment
HMP
Inferred from high throughput mutant phenotype
HGI
Inferred from high throughput genetic interaction
HDA
Inferred from high throughput direct assay
HEP
Inferred from high throughput expression pattern
IDA
Inferred from direct assay
IEP
Inferred from expression pattern
IGI
Inferred from genetic interaction
IMP
Inferred from mutant phenotype
IPI
Inferred from physical interaction
Homology:
IAS
Inferred from ancestral sequence
IBA
Inferred from biological aspect of ancestor
IBD
Inferred from biological aspect of descendant
IKR
Inferred from key residues
IMR
Inferred from missing residues
IRD
Inferred from rapid divergence
ISA
Inferred from sequence alignment
ISM
Inferred from sequence model
ISO
Inferred from sequence orthology
ISS
Inferred from sequence or structural similarity
Automated:
IEA
Inferred from electronic annotation
RCA
Reviewed computational analysis
Other:
IC
Inferred by curator
NAS
Non-traceable author statement
ND
No biological data available
TAS
Traceable author statement

CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0005524ATP bindingISOJ:164563
Molecular FunctionGO:0008094ATP-dependent activity, acting on DNAISOJ:164563
Molecular FunctionGO:0008094ATP-dependent activity, acting on DNAIBAJ:265628
Molecular FunctionGO:0140658ATP-dependent chromatin remodeler activityISOJ:164563
Molecular FunctionGO:0003682chromatin bindingISOJ:164563
Molecular FunctionGO:0003677DNA bindingISOJ:164563
Molecular FunctionGO:0004386helicase activityIEAJ:60000
Molecular FunctionGO:0016787hydrolase activityIEAJ:60000
Molecular FunctionGO:0000166nucleotide bindingIEAJ:60000
Molecular FunctionGO:0030296protein tyrosine kinase activator activityISOJ:73065
Molecular FunctionGO:0070063RNA polymerase bindingISOJ:164563
Molecular FunctionGO:0043565sequence-specific DNA bindingISOJ:164563
Cellular ComponentGO:0110016B-WICH complexISOJ:164563
Cellular ComponentGO:0016604nuclear bodyISOJ:164563
Cellular ComponentGO:0005730nucleolusNASJ:319968
Cellular ComponentGO:0005730nucleolusISOJ:73065
Cellular ComponentGO:0005654nucleoplasmISOJ:164563
Cellular ComponentGO:0005654nucleoplasmISOJ:164563
Cellular ComponentGO:0005634nucleusIBAJ:265628
Cellular ComponentGO:0005634nucleusISOJ:73065
Cellular ComponentGO:0090734site of DNA damageISOJ:164563
Cellular ComponentGO:0008023transcription elongation factor complexISOJ:164563
Biological ProcessGO:0006284base-excision repairISOJ:164563
Biological ProcessGO:0006338chromatin remodelingNASJ:320057
Biological ProcessGO:0000077DNA damage checkpoint signalingISOJ:164563
Biological ProcessGO:0006974DNA damage responseIMPJ:70351
Biological ProcessGO:0006974DNA damage responseIMPJ:105008
Biological ProcessGO:0042262DNA protectionISOJ:155856
Biological ProcessGO:0006281DNA repairISOJ:164563
Biological ProcessGO:0006281DNA repairIGIJ:125672
Biological ProcessGO:0006281DNA repairIGIJ:122881
Biological ProcessGO:0006281DNA repairIGIJ:125672
Biological ProcessGO:0006281DNA repairIMPJ:63469
Biological ProcessGO:0006281DNA repairIGIJ:125672
Biological ProcessGO:0097680double-strand break repair via classical nonhomologous end joiningISOJ:164563
Biological ProcessGO:0008630intrinsic apoptotic signaling pathway in response to DNA damageIMPJ:65265
Biological ProcessGO:0007254JNK cascadeIMPJ:111758
Biological ProcessGO:0035264multicellular organism growthIGIJ:181994
Biological ProcessGO:0035264multicellular organism growthIGIJ:181994
Biological ProcessGO:2001033negative regulation of double-strand break repair via nonhomologous end joiningISOJ:164563
Biological ProcessGO:0007399nervous system developmentIEAJ:60000
Biological ProcessGO:0022008neurogenesisISOJ:164563
Biological ProcessGO:0030182neuron differentiationISOJ:164563
Biological ProcessGO:0031175neuron projection developmentISOJ:164563
Biological ProcessGO:0045494photoreceptor cell maintenanceIMPJ:118275
Biological ProcessGO:0002230positive regulation of defense response to virus by hostISOJ:164563
Biological ProcessGO:0045739positive regulation of DNA repairISOJ:164563
Biological ProcessGO:0045739positive regulation of DNA repairISOJ:164563
Biological ProcessGO:0032786positive regulation of DNA-templated transcription, elongationISOJ:164563
Biological ProcessGO:1905168positive regulation of double-strand break repair via homologous recombinationISOJ:164563
Biological ProcessGO:0010628positive regulation of gene expressionISOJ:164563
Biological ProcessGO:0035066positive regulation of histone acetylationNASJ:319968
Biological ProcessGO:0033141positive regulation of peptidyl-serine phosphorylation of STAT proteinISOJ:164563
Biological ProcessGO:0045943positive regulation of transcription by RNA polymerase INASJ:319968
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IINASJ:319696
Biological ProcessGO:0045945positive regulation of transcription by RNA polymerase IIIISOJ:164563
Biological ProcessGO:0060261positive regulation of transcription initiation by RNA polymerase IIIGIJ:181994
Biological ProcessGO:0060261positive regulation of transcription initiation by RNA polymerase IIIMPJ:181994
Biological ProcessGO:0006290pyrimidine dimer repairIMPJ:40211
Biological ProcessGO:0032784regulation of DNA-templated transcription elongationISOJ:164563
Biological ProcessGO:0034243regulation of transcription elongation by RNA polymerase IIISOJ:155856
Biological ProcessGO:0010332response to gamma radiationIMPJ:92778
Biological ProcessGO:0006979response to oxidative stressIMPJ:81189
Biological ProcessGO:0006979response to oxidative stressISOJ:73065
Biological ProcessGO:0000303response to superoxideIMPJ:92778
Biological ProcessGO:0009636response to toxic substanceIMPJ:70351
Biological ProcessGO:0009411response to UVIMPJ:92778
Biological ProcessGO:0009411response to UVIMPJ:112137
Biological ProcessGO:0010224response to UV-BIMPJ:62605
Biological ProcessGO:0010224response to UV-BIMPJ:118275
Biological ProcessGO:0010165response to X-rayIMPJ:105008
Biological ProcessGO:0010165response to X-rayIMPJ:118275
Biological ProcessGO:0000012single strand break repairISOJ:164563
Biological ProcessGO:0006362transcription elongation by RNA polymerase IIMPJ:198536
Biological ProcessGO:0006283transcription-coupled nucleotide-excision repairISOJ:164563
Biological ProcessGO:0006283transcription-coupled nucleotide-excision repairISOJ:155856
Biological ProcessGO:0006283transcription-coupled nucleotide-excision repairIBAJ:265628
Biological ProcessGO:0006283transcription-coupled nucleotide-excision repairIMPJ:40211
Biological ProcessGO:0006283transcription-coupled nucleotide-excision repairIMPJ:81189

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory