GO Annotations Graph

• Symbol: Pitx3
• Name: paired-like homeodomain transcription factor 3
• ID: MGI:1100498

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0003677	DNA binding	IEA	J:72247
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IDA	J:210940
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IMP	J:210940
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISO	J:155856
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:144189
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:210940
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0000785	chromatin	ISO	J:155856
Cellular Component	GO:0005737	cytoplasm	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IDA	J:168199
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Biological Process	GO:0009653	anatomical structure morphogenesis	IBA	J:265628
Biological Process	GO:0071542	dopaminergic neuron differentiation	IDA	J:144189
Biological Process	GO:0071542	dopaminergic neuron differentiation	IMP	J:99395
Biological Process	GO:0071542	dopaminergic neuron differentiation	TAS	J:227390
Biological Process	GO:0002088	lens development in camera-type eye	IMP	J:144758
Biological Process	GO:0002088	lens development in camera-type eye	IMP	J:151273
Biological Process	GO:0070306	lens fiber cell differentiation	IMP	J:144758
Biological Process	GO:0002089	lens morphogenesis in camera-type eye	IMP	J:151273
Biological Process	GO:0007626	locomotory behavior	IMP	J:125552
Biological Process	GO:0030901	midbrain development	IMP	J:99395
Biological Process	GO:0030901	midbrain development	IMP	J:88592
Biological Process	GO:0030901	midbrain development	IMP	J:125552
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0014014	negative regulation of gliogenesis	ISO	J:155856
Biological Process	GO:0050768	negative regulation of neurogenesis	ISO	J:155856
Biological Process	GO:0048666	neuron development	IMP	J:88592
Biological Process	GO:1904935	positive regulation of cell proliferation in midbrain	ISO	J:155856
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	IDA	J:144189
Biological Process	GO:0043525	positive regulation of neuron apoptotic process	ISO	J:155856
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:210940
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:210940
Biological Process	GO:0006355	regulation of DNA-templated transcription	IDA	J:168199
Biological Process	GO:0010468	regulation of gene expression	IGI	J:199302
Biological Process	GO:0010468	regulation of gene expression	IMP	J:150356
Biological Process	GO:0010468	regulation of gene expression	IDA	J:125222
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628