GO Annotations Graph

• Symbol: Lmx1b
• Name: LIM homeobox transcription factor 1 beta
• ID: MGI:1100513

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:72247
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISO	J:164563
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IDA	J:228113
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:242466
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IDA	J:228113
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	IDA	J:130846
Biological Process	GO:0043010	camera-type eye development	IMP	J:60307
Biological Process	GO:0043010	camera-type eye development	IMP	J:161793
Biological Process	GO:0008283	cell population proliferation	IMP	J:117035
Biological Process	GO:0008283	cell population proliferation	IMP	J:117035
Biological Process	GO:0021954	central nervous system neuron development	IMP	J:116706
Biological Process	GO:0021587	cerebellum morphogenesis	IMP	J:117035
Biological Process	GO:0030199	collagen fibril organization	IMP	J:60307
Biological Process	GO:0071542	dopaminergic neuron differentiation	IGI	J:228113
Biological Process	GO:0071542	dopaminergic neuron differentiation	TAS	J:227390
Biological Process	GO:0071542	dopaminergic neuron differentiation	IMP	J:175535
Biological Process	GO:0009953	dorsal/ventral pattern formation	IEP	J:113891
Biological Process	GO:0030326	embryonic limb morphogenesis	NAS	J:113891
Biological Process	GO:0035108	limb morphogenesis	IMP	J:161785
Biological Process	GO:0007626	locomotory behavior	IGI	J:222854
Biological Process	GO:0007613	memory	IGI	J:222854
Biological Process	GO:0030901	midbrain development	IMP	J:175535
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0030182	neuron differentiation	IBA	J:265628
Biological Process	GO:0030182	neuron differentiation	IMP	J:85552
Biological Process	GO:0030182	neuron differentiation	IMP	J:92064
Biological Process	GO:0001764	neuron migration	IMP	J:92064
Biological Process	GO:0042048	olfactory behavior	IGI	J:222854
Biological Process	GO:0035265	organ growth	IMP	J:117035
Biological Process	GO:0035265	organ growth	IMP	J:117035
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:228113
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:222854
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:117035
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:117035
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:117035
Biological Process	GO:0010506	regulation of autophagy	IMP	J:222854
Biological Process	GO:0006355	regulation of DNA-templated transcription	ISO	J:164563
Biological Process	GO:0010468	regulation of gene expression	IMP	J:161785
Biological Process	GO:0032386	regulation of intracellular transport	IMP	J:222854
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IDA	J:175535
Biological Process	GO:0050808	synapse organization	IGI	J:222854
Biological Process	GO:0002930	trabecular meshwork development	IMP	J:161793