GO Annotations Graph

• Symbol: Rnf4
• Name: ring finger protein 4
• ID: MGI:1201691

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	ISO	J:155856
Molecular Function	GO:0042802	identical protein binding	ISO	J:164563
Molecular Function	GO:0042802	identical protein binding	ISO	J:155856
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0050681	nuclear androgen receptor binding	ISO	J:155856
Molecular Function	GO:0030331	nuclear estrogen receptor binding	ISO	J:155856
Molecular Function	GO:0033142	nuclear progesterone receptor binding	ISO	J:155856
Molecular Function	GO:0031491	nucleosome binding	ISO	J:155856
Molecular Function	GO:0005515	protein binding	IPI	J:166026
Molecular Function	GO:0005515	protein binding	IPI	J:62070
Molecular Function	GO:0032184	SUMO polymer binding	ISO	J:155856
Molecular Function	GO:0032184	SUMO polymer binding	ISO	J:164563
Molecular Function	GO:0017025	TBP-class protein binding	ISO	J:155856
Molecular Function	GO:0008134	transcription factor binding	IBA	J:265628
Molecular Function	GO:0008134	transcription factor binding	IPI	J:63997
Molecular Function	GO:0016740	transferase activity	IEA	J:60000
Molecular Function	GO:0031624	ubiquitin conjugating enzyme binding	ISO	J:155856
Molecular Function	GO:0061630	ubiquitin protein ligase activity	ISO	J:155856
Molecular Function	GO:0061630	ubiquitin protein ligase activity	ISO	J:164563
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	ISO	J:155856
Molecular Function	GO:0008270	zinc ion binding	ISO	J:155856
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IDA	J:62070
Cellular Component	GO:0005829	cytosol	ISO	J:155856
Cellular Component	GO:1990752	microtubule end	ISO	J:164563
Cellular Component	GO:0016604	nuclear body	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:155856
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IDA	J:62070
Cellular Component	GO:0005634	nucleus	IDA	J:62070
Cellular Component	GO:0005634	nucleus	IDA	J:63997
Cellular Component	GO:0016605	PML body	ISO	J:155856
Cellular Component	GO:0016605	PML body	ISO	J:164563
Cellular Component	GO:0016605	PML body	IBA	J:265628
Biological Process	GO:0071480	cellular response to gamma radiation	ISO	J:155856
Biological Process	GO:0072711	cellular response to hydroxyurea	ISO	J:155856
Biological Process	GO:0071394	cellular response to testosterone stimulus	ISO	J:155856
Biological Process	GO:0060548	negative regulation of cell death	ISO	J:155856
Biological Process	GO:0120186	negative regulation of protein localization to chromatin	ISO	J:164563
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ISO	J:155856
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:155856
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:63997
Biological Process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	ISO	J:164563
Biological Process	GO:0051865	protein autoubiquitination	ISO	J:155856
Biological Process	GO:0070979	protein K11-linked ubiquitination	ISO	J:155856
Biological Process	GO:0070936	protein K48-linked ubiquitination	ISO	J:155856
Biological Process	GO:0085020	protein K6-linked ubiquitination	ISO	J:155856
Biological Process	GO:0070534	protein K63-linked ubiquitination	ISO	J:155856
Biological Process	GO:0016567	protein ubiquitination	ISO	J:155856
Biological Process	GO:0090234	regulation of kinetochore assembly	ISO	J:164563
Biological Process	GO:0090169	regulation of spindle assembly	ISO	J:164563
Biological Process	GO:0046685	response to arsenic-containing substance	ISO	J:164563
Biological Process	GO:0046685	response to arsenic-containing substance	ISO	J:155856