GO Annotations Graph

• Symbol: Rtf1
• Name: RTF1, Paf1/RNA polymerase II complex component
• ID: MGI:1309480

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:72247
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:283190
Molecular Function	GO:1990269	RNA polymerase II C-terminal domain phosphoserine binding	IBA	J:265628
Molecular Function	GO:0003697	single-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0016593	Cdc73/Paf1 complex	IPI	J:283190
Cellular Component	GO:0016593	Cdc73/Paf1 complex	ISO	J:164563
Cellular Component	GO:0016593	Cdc73/Paf1 complex	IBA	J:265628
Cellular Component	GO:0005730	nucleolus	IDA	J:50092
Cellular Component	GO:0005634	nucleus	IEA	J:60000
Biological Process	GO:0001832	blastocyst growth	IMP	J:203796
Biological Process	GO:0001711	endodermal cell fate commitment	IMP	J:149841
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IMP	J:149841
Biological Process	GO:0019827	stem cell population maintenance	ISO	J:164563
Biological Process	GO:0019827	stem cell population maintenance	IMP	J:149841
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	ISO	J:164563
Biological Process	GO:0016055	Wnt signaling pathway	IEA	J:60000