GO Annotations Graph

• Symbol: Ly96
• Name: lymphocyte antigen 96
• ID: MGI:1341909

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0001530	lipopolysaccharide binding	IEA	J:72247
Molecular Function	GO:0001875	lipopolysaccharide immune receptor activity	ISO	J:164563
Molecular Function	GO:0001875	lipopolysaccharide immune receptor activity	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:184807
Molecular Function	GO:0005515	protein binding	IPI	J:245260
Molecular Function	GO:0005515	protein binding	IPI	J:127195
Molecular Function	GO:0035662	Toll-like receptor 4 binding	IEA	J:72247
Cellular Component	GO:0005576	extracellular region	IEA	J:60000
Cellular Component	GO:0046696	lipopolysaccharide receptor complex	IDA	J:222669
Cellular Component	GO:0046696	lipopolysaccharide receptor complex	ISO	J:164563
Cellular Component	GO:0046696	lipopolysaccharide receptor complex	IBA	J:265628
Cellular Component	GO:0005886	plasma membrane	ISO	J:164563
Cellular Component	GO:0043235	receptor complex	ISO	J:164563
Biological Process	GO:0071222	cellular response to lipopolysaccharide	IMP	J:222669
Biological Process	GO:0071222	cellular response to lipopolysaccharide	IBA	J:265628
Biological Process	GO:0032497	detection of lipopolysaccharide	ISO	J:164563
Biological Process	GO:0032497	detection of lipopolysaccharide	IBA	J:265628
Biological Process	GO:0002376	immune system process	IEA	J:60000
Biological Process	GO:0006954	inflammatory response	IEA	J:60000
Biological Process	GO:0045087	innate immune response	IEA	J:60000
Biological Process	GO:0045087	innate immune response	IEA	J:72247
Biological Process	GO:0031663	lipopolysaccharide-mediated signaling pathway	IMP	J:222669
Biological Process	GO:0031663	lipopolysaccharide-mediated signaling pathway	IDA	J:63145
Biological Process	GO:0031663	lipopolysaccharide-mediated signaling pathway	IGI	J:63145
Biological Process	GO:0031663	lipopolysaccharide-mediated signaling pathway	IGI	J:63145
Biological Process	GO:0031666	positive regulation of lipopolysaccharide-mediated signaling pathway	IBA	J:265628
Biological Process	GO:0031666	positive regulation of lipopolysaccharide-mediated signaling pathway	ISO	J:63145
Biological Process	GO:0031666	positive regulation of lipopolysaccharide-mediated signaling pathway	IGI	J:63145
Biological Process	GO:0031666	positive regulation of lipopolysaccharide-mediated signaling pathway	IGI	J:63145
Biological Process	GO:0031666	positive regulation of lipopolysaccharide-mediated signaling pathway	IDA	J:63145
Biological Process	GO:0032760	positive regulation of tumor necrosis factor production	IMP	J:222669
Biological Process	GO:0032496	response to lipopolysaccharide	ISO	J:73065
Biological Process	GO:0034142	toll-like receptor 4 signaling pathway	IMP	J:222669
Biological Process	GO:0034142	toll-like receptor 4 signaling pathway	IBA	J:265628
Biological Process	GO:0002224	toll-like receptor signaling pathway	ISO	J:164563