GO Annotations Graph

• Symbol: Limd1
• Name: LIM domains containing 1
• ID: MGI:1352502

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:183217
Molecular Function	GO:0005515	protein binding	IPI	J:118130
Molecular Function	GO:0003714	transcription corepressor activity	IDA	J:131451
Molecular Function	GO:0003714	transcription corepressor activity	IBA	J:265628
Cellular Component	GO:0005912	adherens junction	ISO	J:164563
Cellular Component	GO:0005912	adherens junction	IBA	J:265628
Cellular Component	GO:0030054	cell junction	IEA	J:60000
Cellular Component	GO:0005737	cytoplasm	IDA	J:138996
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0005925	focal adhesion	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0000932	P-body	IBA	J:265628
Cellular Component	GO:0000932	P-body	ISO	J:73065
Cellular Component	GO:0005886	plasma membrane	ISO	J:164563
Cellular Component	GO:0016442	RISC complex	ISO	J:73065
Cellular Component	GO:0005667	transcription regulator complex	IBA	J:265628
Biological Process	GO:0016477	cell migration	ISO	J:164563
Biological Process	GO:0007010	cytoskeleton organization	ISO	J:164563
Biological Process	GO:0007010	cytoskeleton organization	IBA	J:265628
Biological Process	GO:0035195	miRNA-mediated gene silencing	ISO	J:73065
Biological Process	GO:0090090	negative regulation of canonical Wnt signaling pathway	IMP	J:138996
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	ISO	J:164563
Biological Process	GO:0035331	negative regulation of hippo signaling	ISO	J:164563
Biological Process	GO:0035331	negative regulation of hippo signaling	IBA	J:265628
Biological Process	GO:0045668	negative regulation of osteoblast differentiation	IMP	J:138996
Biological Process	GO:0002076	osteoblast development	IMP	J:118130
Biological Process	GO:0002076	osteoblast development	IMP	J:138996
Biological Process	GO:0033962	P-body assembly	ISO	J:73065
Biological Process	GO:0016310	phosphorylation	ISO	J:164563
Biological Process	GO:2000637	positive regulation of miRNA-mediated gene silencing	ISO	J:164563
Biological Process	GO:2000637	positive regulation of miRNA-mediated gene silencing	IBA	J:265628
Biological Process	GO:0008360	regulation of cell shape	ISO	J:164563
Biological Process	GO:0006355	regulation of DNA-templated transcription	IBA	J:265628
Biological Process	GO:0001666	response to hypoxia	ISO	J:164563
Biological Process	GO:0001666	response to hypoxia	IBA	J:265628
Biological Process	GO:0031047	RNA-mediated gene silencing	IEA	J:60000