GO Annotations Graph

• Symbol: Cpsf6
• Name: cleavage and polyadenylation specific factor 6
• ID: MGI:1913948

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:1990448	exon-exon junction complex binding	ISO	J:164563
Molecular Function	GO:0003729	mRNA binding	ISO	J:164563
Molecular Function	GO:0003729	mRNA binding	IBA	J:265628
Molecular Function	GO:0003676	nucleic acid binding	IEA	J:72247
Molecular Function	GO:0005515	protein binding	IPI	J:262823
Molecular Function	GO:0043023	ribosomal large subunit binding	ISO	J:164563
Molecular Function	GO:0003723	RNA binding	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0035061	interchromatin granule	ISO	J:164563
Cellular Component	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	ISO	J:164563
Cellular Component	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	IBA	J:265628
Cellular Component	GO:0005849	mRNA cleavage factor complex	ISO	J:164563
Cellular Component	GO:0016607	nuclear speck	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:135435
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0042382	paraspeckles	ISO	J:164563
Cellular Component	GO:0005726	perichromatin fibrils	ISO	J:164563
Cellular Component	GO:1990904	ribonucleoprotein complex	ISO	J:142821
Biological Process	GO:0051179	localization	ISO	J:164563
Biological Process	GO:1990120	messenger ribonucleoprotein complex assembly	ISO	J:164563
Biological Process	GO:0031124	mRNA 3'-end processing	ISO	J:164563
Biological Process	GO:0110104	mRNA alternative polyadenylation	ISO	J:164563
Biological Process	GO:0110104	mRNA alternative polyadenylation	IBA	J:265628
Biological Process	GO:0006397	mRNA processing	ISO	J:164563
Biological Process	GO:0046833	positive regulation of RNA export from nucleus	ISO	J:164563
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	ISO	J:164563
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	IBA	J:265628
Biological Process	GO:0051290	protein heterotetramerization	ISO	J:164563
Biological Process	GO:0051262	protein tetramerization	ISO	J:164563