Smarcd3 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Smarcd3
SWI/SNF related BAF chromatin remodeling complex subunit D3
MGI:1914243

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003682	chromatin binding	ISO	J:155856
Molecular Function	GO:0140297	DNA-binding transcription factor binding	ISO	J:164563
Molecular Function	GO:0016922	nuclear receptor binding	ISO	J:164563
Molecular Function	GO:0016922	nuclear receptor binding	ISO	J:164563
Molecular Function	GO:0030374	nuclear receptor coactivator activity	ISO	J:164563
Molecular Function	GO:0005515	protein binding	IPI	J:248235
Molecular Function	GO:0005515	protein binding	IPI	J:180159
Molecular Function	GO:0005515	protein binding	IPI	J:94180
Molecular Function	GO:0005102	signaling receptor binding	ISO	J:164563
Molecular Function	GO:0003712	transcription coregulator activity	IBA	J:265628
Molecular Function	GO:0001221	transcription coregulator binding	ISO	J:164563
Cellular Component	GO:0035060	brahma complex	NAS	J:35263
Cellular Component	GO:0000785	chromatin	ISO	J:164563
Cellular Component	GO:0000785	chromatin	NAS	J:320042
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0071565	nBAF complex	IDA	J:132090
Cellular Component	GO:0071565	nBAF complex	NAS	J:132101
Cellular Component	GO:0071565	nBAF complex	IDA	J:199644
Cellular Component	GO:0071564	npBAF complex	IDA	J:132090
Cellular Component	GO:0071564	npBAF complex	NAS	J:35263
Cellular Component	GO:0071564	npBAF complex	ISO	J:164563
Cellular Component	GO:0071564	npBAF complex	IDA	J:199644
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:139641
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0016514	SWI/SNF complex	ISO	J:164563
Cellular Component	GO:0016514	SWI/SNF complex	NAS	J:35263
Cellular Component	GO:0016514	SWI/SNF complex	IDA	J:283189
Cellular Component	GO:0016514	SWI/SNF complex	IBA	J:265628
Cellular Component	GO:0070603	SWI/SNF superfamily-type complex	IDA	J:212358
Biological Process	GO:0003219	cardiac right ventricle formation	IMP	J:143626
Biological Process	GO:0006325	chromatin organization	IEA	J:60000
Biological Process	GO:0006338	chromatin remodeling	ISO	J:164563
Biological Process	GO:0006338	chromatin remodeling	NAS	J:320039
Biological Process	GO:0003007	heart morphogenesis	IMP	J:94180
Biological Process	GO:0042692	muscle cell differentiation	IMP	J:94180
Biological Process	GO:0007399	nervous system development	IEA	J:60000
Biological Process	GO:0003407	neural retina development	IEP	J:139641
Biological Process	GO:0006337	nucleosome disassembly	ISO	J:164563
Biological Process	GO:0045597	positive regulation of cell differentiation	NAS	J:74389
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ISO	J:164563
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	IDA	J:94180
Biological Process	GO:2000781	positive regulation of double-strand break repair	NAS	J:319983
Biological Process	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	ISO	J:155856
Biological Process	GO:0045663	positive regulation of myoblast differentiation	NAS	J:320040
Biological Process	GO:0002052	positive regulation of neuroblast proliferation	ISO	J:164563
Biological Process	GO:0051152	positive regulation of smooth muscle cell differentiation	ISO	J:155856
Biological Process	GO:0045582	positive regulation of T cell differentiation	NAS	J:131676
Biological Process	GO:0070316	regulation of G0 to G1 transition	NAS	J:74389
Biological Process	GO:2000045	regulation of G1/S transition of mitotic cell cycle	NAS	J:320113
Biological Process	GO:0030071	regulation of mitotic metaphase/anaphase transition	NAS	J:198738
Biological Process	GO:2000819	regulation of nucleotide-excision repair	NAS	J:320041
Biological Process	GO:0043393	regulation of protein binding	IDA	J:94180
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	NAS	J:320308
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	NAS	J:68501
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	NAS	J:132101
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0003139	secondary heart field specification	IMP	J:143626

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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