GO Annotations Graph

• Symbol: Sfpq
• Name: splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
• ID: MGI:1918764

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003682	chromatin binding	IDA	J:222150
Molecular Function	GO:0003677	DNA binding	ISO	J:164563
Molecular Function	GO:0042826	histone deacetylase binding	ISO	J:164563
Molecular Function	GO:0003676	nucleic acid binding	IEA	J:72247
Molecular Function	GO:0005515	protein binding	IPI	J:189236
Molecular Function	GO:0005515	protein binding	IPI	J:144189
Molecular Function	GO:0005515	protein binding	IPI	J:242466
Molecular Function	GO:0005515	protein binding	IPI	J:173532
Molecular Function	GO:0005515	protein binding	IPI	J:193640
Molecular Function	GO:0005515	protein binding	IPI	J:173728
Molecular Function	GO:0005515	protein binding	IPI	J:173816
Molecular Function	GO:0005515	protein binding	IPI	J:137945
Molecular Function	GO:0005515	protein binding	IPI	J:199302
Molecular Function	GO:0005515	protein binding	IPI	J:173728
Molecular Function	GO:0042803	protein homodimerization activity	ISO	J:164563
Molecular Function	GO:0003723	RNA binding	IEA	J:72247
Molecular Function	GO:0003723	RNA binding	IEA	J:60000
Molecular Function	GO:0000976	transcription cis-regulatory region binding	IDA	J:173532
Cellular Component	GO:0000785	chromatin	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IEA	J:60000
Cellular Component	GO:0030425	dendrite	IPI	J:96571
Cellular Component	GO:0032839	dendrite cytoplasm	IPI	J:96571
Cellular Component	GO:0016363	nuclear matrix	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0042382	paraspeckles	ISO	J:164563
Cellular Component	GO:0042382	paraspeckles	IDA	J:171281
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	IDA	J:222150
Biological Process	GO:0002218	activation of innate immune response	ISO	J:164563
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	ISO	J:164563
Biological Process	GO:0000380	alternative mRNA splicing, via spliceosome	IBA	J:265628
Biological Process	GO:0006338	chromatin remodeling	IMP	J:173532
Biological Process	GO:0051276	chromosome organization	IMP	J:173816
Biological Process	GO:0098963	dendritic transport of messenger ribonucleoprotein complex	IDA	J:96571
Biological Process	GO:0098963	dendritic transport of messenger ribonucleoprotein complex	IMP	J:96571
Biological Process	GO:0098963	dendritic transport of messenger ribonucleoprotein complex	IDA	J:96571
Biological Process	GO:0098963	dendritic transport of messenger ribonucleoprotein complex	IDA	J:96571
Biological Process	GO:0098963	dendritic transport of messenger ribonucleoprotein complex	IPI	J:96571
Biological Process	GO:0098963	dendritic transport of messenger ribonucleoprotein complex	IPI	J:96571
Biological Process	GO:0006974	DNA damage response	IMP	J:173816
Biological Process	GO:0006281	DNA repair	IEA	J:60000
Biological Process	GO:0000724	double-strand break repair via homologous recombination	ISO	J:173816
Biological Process	GO:0002376	immune system process	IEA	J:60000
Biological Process	GO:0045087	innate immune response	IEA	J:60000
Biological Process	GO:0006397	mRNA processing	IEA	J:60000
Biological Process	GO:0042754	negative regulation of circadian rhythm	IMP	J:173532
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	IDA	J:189236
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	IMP	J:173532
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:1902177	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway	ISO	J:164563
Biological Process	GO:0045876	positive regulation of sister chromatid cohesion	IMP	J:173816
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0051726	regulation of cell cycle	IMP	J:173816
Biological Process	GO:0042752	regulation of circadian rhythm	IMP	J:189236
Biological Process	GO:0006355	regulation of DNA-templated transcription	IBA	J:265628
Biological Process	GO:0048511	rhythmic process	IEA	J:60000
Biological Process	GO:0008380	RNA splicing	IEA	J:60000