GO Annotations Graph

• Symbol: Ybx3
• Name: Y box protein 3
• ID: MGI:2137670

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IDA	J:80583
Molecular Function	GO:0003730	mRNA 3'-UTR binding	IDA	J:67628
Molecular Function	GO:0003676	nucleic acid binding	IBA	J:265628
Molecular Function	GO:1905538	polysome binding	IDA	J:77752
Molecular Function	GO:0005515	protein binding	IPI	J:157813
Molecular Function	GO:0043021	ribonucleoprotein complex binding	IDA	J:67628
Molecular Function	GO:0003723	RNA binding	IEA	J:60000
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IDA	J:211248
Molecular Function	GO:0003697	single-stranded DNA binding	ISO	J:155856
Cellular Component	GO:0005737	cytoplasm	IDA	J:67628
Cellular Component	GO:0005829	cytosol	ISO	J:164563
Cellular Component	GO:0005921	gap junction	ISO	J:108862
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	IDA	J:80583
Cellular Component	GO:0045202	synapse	IDA	J:263419
Cellular Component	GO:0045202	synapse	EXP	J:263419
Biological Process	GO:0006915	apoptotic process	IMP	J:115970
Biological Process	GO:0071474	cellular hyperosmotic response	ISO	J:164563
Biological Process	GO:0071356	cellular response to tumor necrosis factor	ISO	J:164563
Biological Process	GO:0035234	ectopic germ cell programmed cell death	IMP	J:115970
Biological Process	GO:0009566	fertilization	IMP	J:115970
Biological Process	GO:0001701	in utero embryonic development	IGI	J:115970
Biological Process	GO:0008584	male gonad development	IMP	J:115970
Biological Process	GO:0043066	negative regulation of apoptotic process	IMP	J:115970
Biological Process	GO:0051093	negative regulation of developmental process	IMP	J:115970
Biological Process	GO:1902219	negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress	ISO	J:164563
Biological Process	GO:0060546	negative regulation of necroptotic process	ISO	J:164563
Biological Process	GO:2000242	negative regulation of reproductive process	IMP	J:115970
Biological Process	GO:0048642	negative regulation of skeletal muscle tissue development	IDA	J:139507
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:155856
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IDA	J:211248
Biological Process	GO:0046622	positive regulation of organ growth	IMP	J:115970
Biological Process	GO:0010468	regulation of gene expression	IBA	J:265628
Biological Process	GO:0007283	spermatogenesis	IMP	J:115970