GO Annotations Graph

• Symbol: Sall4
• Name: spalt like transcription factor 4
• ID: MGI:2139360

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:150360
Molecular Function	GO:0005515	protein binding	IPI	J:184123
Molecular Function	GO:0005515	protein binding	IPI	J:184685
Molecular Function	GO:0005515	protein binding	IPI	J:240581
Molecular Function	GO:0005515	protein binding	IPI	J:154112
Molecular Function	GO:0005515	protein binding	IPI	J:105332
Molecular Function	GO:0005515	protein binding	IPI	J:105332
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0008134	transcription factor binding	IPI	J:240581
Cellular Component	GO:0005737	cytoplasm	IEA	J:60000
Cellular Component	GO:0000792	heterochromatin	IDA	J:123390
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	IDA	J:154112
Cellular Component	GO:0032991	protein-containing complex	IDA	J:154112
Cellular Component	GO:0005667	transcription regulator complex	IC	J:105332
Cellular Component	GO:0005667	transcription regulator complex	IC	J:105332
Biological Process	GO:0030326	embryonic limb morphogenesis	IGI	J:105332
Biological Process	GO:0030326	embryonic limb morphogenesis	IMP	J:105332
Biological Process	GO:0007507	heart development	IMP	J:105332
Biological Process	GO:0001701	in utero embryonic development	IMP	J:115635
Biological Process	GO:0001833	inner cell mass cell proliferation	IMP	J:118119
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IGI	J:105332
Biological Process	GO:0001843	neural tube closure	IGI	J:118119
Biological Process	GO:0001843	neural tube closure	IMP	J:118119
Biological Process	GO:0021915	neural tube development	IGI	J:143350
Biological Process	GO:0021915	neural tube development	IGI	J:143350
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:105332
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:105332
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0035019	somatic stem cell population maintenance	IMP	J:164442
Biological Process	GO:0009888	tissue development	IMP	J:115635
Biological Process	GO:0009888	tissue development	IMP	J:115635
Biological Process	GO:0003281	ventricular septum development	IMP	J:118119
Biological Process	GO:0003281	ventricular septum development	IGI	J:118119