GO Annotations Graph

• Symbol: Taf4
• Name: TATA-box binding protein associated factor 4
• ID: MGI:2152346

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0017162	aryl hydrocarbon receptor binding	ISO	J:164563
Molecular Function	GO:0001046	core promoter sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0003677	DNA binding	IBA	J:265628
Molecular Function	GO:0003677	DNA binding	IDA	J:138818
Molecular Function	GO:0005515	protein binding	IPI	J:83344
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	ISO	J:164563
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	IBA	J:265628
Cellular Component	GO:0000785	chromatin	ISO	J:164563
Cellular Component	GO:0005829	cytosol	ISO	J:164563
Cellular Component	GO:0001673	male germ cell nucleus	IDA	J:83344
Cellular Component	GO:0001673	male germ cell nucleus	IDA	J:83344
Cellular Component	GO:0071339	MLL1 complex	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:181994
Cellular Component	GO:0005634	nucleus	IDA	J:138818
Cellular Component	GO:0032991	protein-containing complex	ISO	J:164563
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:164563
Cellular Component	GO:0005669	transcription factor TFIID complex	IBA	J:265628
Cellular Component	GO:0005669	transcription factor TFIID complex	ISO	J:86236
Cellular Component	GO:0033276	transcription factor TFTC complex	NAS	J:320038
Cellular Component	GO:0033276	transcription factor TFTC complex	ISO	J:164563
Biological Process	GO:0006351	DNA-templated transcription	TAS	J:71679
Biological Process	GO:0006351	DNA-templated transcription	IDA	J:71956
Biological Process	GO:0006352	DNA-templated transcription initiation	ISO	J:164563
Biological Process	GO:0043966	histone H3 acetylation	ISO	J:164563
Biological Process	GO:0035521	monoubiquitinated histone deubiquitination	ISO	J:164563
Biological Process	GO:0035522	monoubiquitinated histone H2A deubiquitination	ISO	J:164563
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0001541	ovarian follicle development	IMP	J:71679
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	NAS	J:320111
Biological Process	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006468	protein phosphorylation	ISO	J:164563
Biological Process	GO:0006282	regulation of DNA repair	NAS	J:320001
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0051123	RNA polymerase II preinitiation complex assembly	ISO	J:164563
Biological Process	GO:0006366	transcription by RNA polymerase II	TAS	J:71679
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	ISO	J:164563
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	IBA	J:265628