Lrrtm4 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Lrrtm4
leucine rich repeat transmembrane neuronal 4
MGI:2389180

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0043395	heparan sulfate proteoglycan binding	IDA	J:201655
Cellular Component	GO:0032281	AMPA glutamate receptor complex	IDA	J:188364
Cellular Component	GO:0031012	extracellular matrix	IBA	J:265628
Cellular Component	GO:0005615	extracellular space	IBA	J:265628
Cellular Component	GO:0098982	GABA-ergic synapse	IDA	J:291953
Cellular Component	GO:0098982	GABA-ergic synapse	IDA	J:291953
Cellular Component	GO:0098982	GABA-ergic synapse	IDA	J:291953
Cellular Component	GO:0098978	glutamatergic synapse	ISO	J:155856
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IMP	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IMP	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IMP	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IMP	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:201656
Cellular Component	GO:0098978	glutamatergic synapse	IDA	J:201656
Cellular Component	GO:0016020	membrane	ISS	J:82974
Cellular Component	GO:0098684	photoreceptor ribbon synapse	IDA	J:291953
Cellular Component	GO:0098684	photoreceptor ribbon synapse	IDA	J:291953
Cellular Component	GO:0098684	photoreceptor ribbon synapse	IDA	J:291953
Cellular Component	GO:0005886	plasma membrane	IEA	J:60000
Cellular Component	GO:0098839	postsynaptic density membrane	ISO	J:155856
Cellular Component	GO:0045211	postsynaptic membrane	IDA	J:201655
Cellular Component	GO:0045202	synapse	IDA	J:291953
Cellular Component	GO:0045202	synapse	IDA	J:291953
Cellular Component	GO:0045202	synapse	IDA	J:291953
Cellular Component	GO:0045202	synapse	IDA	J:291953
Cellular Component	GO:0045202	synapse	IDA	J:291953
Cellular Component	GO:0045202	synapse	IDA	J:291953
Biological Process	GO:0097113	AMPA glutamate receptor clustering	IMP	J:201655
Biological Process	GO:0072578	neurotransmitter-gated ion channel clustering	IDA	J:201655
Biological Process	GO:0051965	positive regulation of synapse assembly	IDA	J:211830
Biological Process	GO:1901629	regulation of presynaptic membrane organization	IDA	J:201655
Biological Process	GO:0051963	regulation of synapse assembly	IDA	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IDA	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IDA	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IDA	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IMP	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IMP	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IMP	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IMP	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IDA	J:201656
Biological Process	GO:0051963	regulation of synapse assembly	IDA	J:201656
Biological Process	GO:0050808	synapse organization	ISO	J:73065

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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