GO Annotations Graph

• Symbol: Ythdc1
• Name: YTH domain containing 1
• ID: MGI:2443713

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003729	mRNA binding	IBA	J:265628
Molecular Function	GO:1990247	N6-methyladenosine-containing RNA binding	ISO	J:155856
Molecular Function	GO:1990247	N6-methyladenosine-containing RNA binding	ISO	J:164563
Molecular Function	GO:1990247	N6-methyladenosine-containing RNA binding	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:309584
Molecular Function	GO:0005515	protein binding	IPI	J:262823
Molecular Function	GO:0003723	RNA binding	ISO	J:164563
Cellular Component	GO:0016604	nuclear body	ISO	J:155856
Cellular Component	GO:0016607	nuclear speck	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:155856
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	IBA	J:265628
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:262823
Cellular Component	GO:0005634	nucleus	IDA	J:262823
Cellular Component	GO:0005634	nucleus	IDA	J:262823
Cellular Component	GO:0005634	nucleus	IDA	J:262823
Cellular Component	GO:0005886	plasma membrane	ISO	J:164563
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	ISO	J:164563
Biological Process	GO:0001701	in utero embryonic development	IMP	J:262823
Biological Process	GO:0110104	mRNA alternative polyadenylation	IMP	J:262823
Biological Process	GO:0006406	mRNA export from nucleus	ISO	J:164563
Biological Process	GO:0006397	mRNA processing	IEA	J:60000
Biological Process	GO:0006376	mRNA splice site selection	ISO	J:164563
Biological Process	GO:0000398	mRNA splicing, via spliceosome	ISO	J:155856
Biological Process	GO:0000398	mRNA splicing, via spliceosome	IBA	J:265628
Biological Process	GO:0010608	post-transcriptional regulation of gene expression	IMP	J:255330
Biological Process	GO:0048160	primary follicle stage	IMP	J:262823
Biological Process	GO:0048160	primary follicle stage	IMP	J:262823
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IBA	J:265628
Biological Process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IMP	J:262823
Biological Process	GO:0048024	regulation of mRNA splicing, via spliceosome	ISO	J:164563
Biological Process	GO:0008380	RNA splicing	IEA	J:60000
Biological Process	GO:0007283	spermatogenesis	IMP	J:262823