GO Annotations Graph

• Symbol: Npas4
• Name: neuronal PAS domain protein 4
• ID: MGI:2664186

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IMP	J:214381
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IMP	J:143367
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IMP	J:179046
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:80366
Molecular Function	GO:0005515	protein binding	IPI	J:238807
Molecular Function	GO:0046983	protein dimerization activity	IEA	J:72247
Molecular Function	GO:0046982	protein heterodimerization activity	ISO	J:164563
Molecular Function	GO:0046982	protein heterodimerization activity	IDA	J:238807
Molecular Function	GO:0044877	protein-containing complex binding	ISO	J:155856
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:179046
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:80366
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:80366
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IDA	J:207770
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-9769840
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-NUL-9769909
Cellular Component	GO:0005634	nucleus	IDA	J:207770
Cellular Component	GO:0005634	nucleus	IDA	J:93202
Cellular Component	GO:0005667	transcription regulator complex	IDA	J:80366
Biological Process	GO:0030154	cell differentiation	IEA	J:60000
Biological Process	GO:0071229	cellular response to acid chemical	IMP	J:207770
Biological Process	GO:0071386	cellular response to corticosterone stimulus	IDA	J:164698
Biological Process	GO:0033554	cellular response to stress	IDA	J:164698
Biological Process	GO:0060079	excitatory postsynaptic potential	IMP	J:214381
Biological Process	GO:0060080	inhibitory postsynaptic potential	IMP	J:143367
Biological Process	GO:0060080	inhibitory postsynaptic potential	IMP	J:214381
Biological Process	GO:0060080	inhibitory postsynaptic potential	IMP	J:207770
Biological Process	GO:1904862	inhibitory synapse assembly	IMP	J:143367
Biological Process	GO:0007612	learning	IMP	J:179046
Biological Process	GO:0007616	long-term memory	IMP	J:179046
Biological Process	GO:0007616	long-term memory	IMP	J:192118
Biological Process	GO:0007399	nervous system development	IEA	J:60000
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	IMP	J:143367
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	IMP	J:179046
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	IDA	J:93202
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:214381
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:143367
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:179046
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:80366
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:80366
Biological Process	GO:0048167	regulation of synaptic plasticity	IMP	J:143367
Biological Process	GO:0032228	regulation of synaptic transmission, GABAergic	IMP	J:143367
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0007614	short-term memory	IMP	J:179046
Biological Process	GO:0035176	social behavior	IMP	J:192118