GO Annotations Graph

• Symbol: Col3a1
• Name: collagen, type III, alpha 1
• ID: MGI:88453

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0005201	extracellular matrix structural constituent	ISO	J:164563
Molecular Function	GO:0005201	extracellular matrix structural constituent	IBA	J:265628
Molecular Function	GO:0030020	extracellular matrix structural constituent conferring tensile strength	RCA	J:265604
Molecular Function	GO:0030020	extracellular matrix structural constituent conferring tensile strength	RCA	J:265607
Molecular Function	GO:0005178	integrin binding	ISO	J:164563
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0048407	platelet-derived growth factor binding	ISO	J:73065
Molecular Function	GO:0002020	protease binding	ISO	J:164563
Molecular Function	GO:0046332	SMAD binding	IPI	J:86396
Molecular Function	GO:0046332	SMAD binding	IPI	J:86396
Molecular Function	GO:0046332	SMAD binding	IPI	J:86396
Cellular Component	GO:0005581	collagen trimer	IDA	J:128284
Cellular Component	GO:0005581	collagen trimer	IDA	J:34409
Cellular Component	GO:0005586	collagen type III trimer	ISO	J:164563
Cellular Component	GO:0005586	collagen type III trimer	IDA	J:20667
Cellular Component	GO:0062023	collagen-containing extracellular matrix	ISO	J:164563
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HDA	J:213088
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HDA	J:265607
Cellular Component	GO:0062023	collagen-containing extracellular matrix	ISO	J:155856
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HDA	J:265604
Cellular Component	GO:0031012	extracellular matrix	IBA	J:265628
Cellular Component	GO:0031012	extracellular matrix	IDA	J:32939
Cellular Component	GO:0031012	extracellular matrix	IDA	J:52170
Cellular Component	GO:0031012	extracellular matrix	IDA	J:30059
Cellular Component	GO:0005576	extracellular region	IEA	J:60000
Cellular Component	GO:0005615	extracellular space	ISO	J:164563
Cellular Component	GO:0005615	extracellular space	HDA	J:221550
Cellular Component	GO:0005615	extracellular space	IBA	J:265628
Biological Process	GO:0035904	aorta development	IMP	J:180733
Biological Process	GO:0035904	aorta development	IMP	J:186048
Biological Process	GO:0035904	aorta development	IMP	J:310160
Biological Process	GO:0060414	aorta smooth muscle tissue morphogenesis	IMP	J:180733
Biological Process	GO:0071711	basement membrane organization	IMP	J:319898
Biological Process	GO:0001568	blood vessel development	IMP	J:39273
Biological Process	GO:0051216	cartilage development	IMP	J:287004
Biological Process	GO:0007160	cell-matrix adhesion	ISO	J:164563
Biological Process	GO:0071230	cellular response to amino acid stimulus	IDA	J:164409
Biological Process	GO:0021987	cerebral cortex development	IMP	J:176019
Biological Process	GO:0002062	chondrocyte differentiation	IMP	J:287004
Biological Process	GO:0030199	collagen fibril organization	ISO	J:164563
Biological Process	GO:0030199	collagen fibril organization	IMP	J:186048
Biological Process	GO:0030199	collagen fibril organization	IMP	J:287004
Biological Process	GO:0030199	collagen fibril organization	IMP	J:271088
Biological Process	GO:0030199	collagen fibril organization	IMP	J:215403
Biological Process	GO:0030199	collagen fibril organization	IMP	J:271088
Biological Process	GO:0030199	collagen fibril organization	IMP	J:39273
Biological Process	GO:0048565	digestive tract development	IMP	J:186048
Biological Process	GO:0048565	digestive tract development	IMP	J:39273
Biological Process	GO:0048251	elastic fiber assembly	IMP	J:215403
Biological Process	GO:0060350	endochondral bone morphogenesis	IMP	J:136457
Biological Process	GO:0030198	extracellular matrix organization	IBA	J:265628
Biological Process	GO:0030198	extracellular matrix organization	IMP	J:215227
Biological Process	GO:0030198	extracellular matrix organization	IMP	J:215227
Biological Process	GO:0030198	extracellular matrix organization	IMP	J:287004
Biological Process	GO:0048144	fibroblast proliferation	IMP	J:136457
Biological Process	GO:0010467	gene expression	IMP	J:136457
Biological Process	GO:0010467	gene expression	IMP	J:215227
Biological Process	GO:0010467	gene expression	IMP	J:215227
Biological Process	GO:0007507	heart development	ISO	J:164563
Biological Process	GO:0001701	in utero embryonic development	IMP	J:215227
Biological Process	GO:0001701	in utero embryonic development	IMP	J:215227
Biological Process	GO:0007229	integrin-mediated signaling pathway	ISO	J:164563
Biological Process	GO:0021819	layer formation in cerebral cortex	IMP	J:319898
Biological Process	GO:0036022	limb joint morphogenesis	IMP	J:287004
Biological Process	GO:0030324	lung development	IMP	J:136457
Biological Process	GO:0035264	multicellular organism growth	IMP	J:136457
Biological Process	GO:0050777	negative regulation of immune response	ISO	J:164563
Biological Process	GO:2001223	negative regulation of neuron migration	IMP	J:176019
Biological Process	GO:0001764	neuron migration	IMP	J:319898
Biological Process	GO:0018149	peptide cross-linking	ISO	J:164563
Biological Process	GO:0035025	positive regulation of Rho protein signal transduction	IDA	J:176019
Biological Process	GO:1990776	response to angiotensin	IMP	J:310160
Biological Process	GO:0034097	response to cytokine	ISO	J:164563
Biological Process	GO:0009314	response to radiation	ISO	J:164563
Biological Process	GO:0043588	skin development	ISO	J:164563
Biological Process	GO:0043588	skin development	IMP	J:215227
Biological Process	GO:0043588	skin development	IMP	J:215403
Biological Process	GO:0043588	skin development	IMP	J:215227
Biological Process	GO:0097435	supramolecular fiber organization	ISO	J:164563
Biological Process	GO:0001894	tissue homeostasis	IMP	J:271088
Biological Process	GO:0001894	tissue homeostasis	IMP	J:271088
Biological Process	GO:0007179	transforming growth factor beta receptor signaling pathway	ISO	J:164563
Biological Process	GO:0032905	transforming growth factor beta1 production	IMP	J:215403
Biological Process	GO:0042060	wound healing	ISO	J:164563