Ldb1 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Ldb1
LIM domain binding 1
MGI:894762

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003682	chromatin binding	IDA	J:146089
Molecular Function	GO:0003682	chromatin binding	IDA	J:139179
Molecular Function	GO:0003682	chromatin binding	IDA	J:146089
Molecular Function	GO:0003682	chromatin binding	IDA	J:139179
Molecular Function	GO:0003677	DNA binding	IDA	J:118839
Molecular Function	GO:0140297	DNA-binding transcription factor binding	ISO	J:164563
Molecular Function	GO:0140297	DNA-binding transcription factor binding	IPI	J:328860
Molecular Function	GO:0019899	enzyme binding	IPI	J:161034
Molecular Function	GO:0019899	enzyme binding	ISO	J:164563
Molecular Function	GO:0042802	identical protein binding	IPI	J:147271
Molecular Function	GO:0030274	LIM domain binding	IDA	J:41553
Molecular Function	GO:0030274	LIM domain binding	IPI	J:118838
Molecular Function	GO:0030274	LIM domain binding	ISO	J:164563
Molecular Function	GO:0030274	LIM domain binding	IDA	J:118840
Molecular Function	GO:0030274	LIM domain binding	IBA	J:265628
Molecular Function	GO:0030274	LIM domain binding	IPI	J:41049
Molecular Function	GO:0030274	LIM domain binding	IPI	J:41049
Molecular Function	GO:0005515	protein binding	IPI	J:160776
Molecular Function	GO:0005515	protein binding	IPI	J:177242
Molecular Function	GO:0005515	protein binding	IPI	J:229373
Molecular Function	GO:0005515	protein binding	IPI	J:200299
Molecular Function	GO:0005515	protein binding	IPI	J:118839
Molecular Function	GO:0005515	protein binding	IPI	J:200395
Molecular Function	GO:0005515	protein binding	IPI	J:150700
Molecular Function	GO:0005515	protein binding	IPI	J:155127
Molecular Function	GO:0005515	protein binding	IPI	J:226614
Molecular Function	GO:0005515	protein binding	IPI	J:152175
Molecular Function	GO:0005515	protein binding	IPI	J:129101
Molecular Function	GO:0005515	protein binding	IPI	J:152175
Molecular Function	GO:0005515	protein binding	IPI	J:147271
Molecular Function	GO:0005515	protein binding	IPI	J:41552
Molecular Function	GO:0005515	protein binding	IPI	J:129101
Molecular Function	GO:0005515	protein binding	IPI	J:147271
Molecular Function	GO:0005515	protein binding	IPI	J:51686
Molecular Function	GO:0042803	protein homodimerization activity	IDA	J:118838
Molecular Function	GO:0042803	protein homodimerization activity	IDA	J:118840
Molecular Function	GO:0043621	protein self-association	IPI	J:147271
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	ISO	J:164563
Molecular Function	GO:0003713	transcription coactivator activity	IMP	J:328860
Molecular Function	GO:0003712	transcription coregulator activity	IEA	J:72247
Cellular Component	GO:1990907	beta-catenin-TCF complex	ISO	J:164563
Cellular Component	GO:0031252	cell leading edge	IDA	J:229373
Cellular Component	GO:0000785	chromatin	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-9010548
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-9753028
Cellular Component	GO:0005634	nucleus	IDA	J:41553
Cellular Component	GO:0005634	nucleus	IDA	J:118839
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	IDA	J:146089
Cellular Component	GO:0032991	protein-containing complex	IPI	J:118839
Cellular Component	GO:0032991	protein-containing complex	IPI	J:118839
Cellular Component	GO:0032991	protein-containing complex	IDA	J:98485
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	IDA	J:51686
Cellular Component	GO:0005667	transcription regulator complex	ISO	J:164563
Cellular Component	GO:0005667	transcription regulator complex	IMP	J:328860
Cellular Component	GO:0005667	transcription regulator complex	IBA	J:265628
Cellular Component	GO:0005667	transcription regulator complex	IDA	J:226614
Cellular Component	GO:0005667	transcription regulator complex	IDA	J:147271
Biological Process	GO:0009948	anterior/posterior axis specification	IMP	J:81152
Biological Process	GO:0007155	cell adhesion	IGI	J:129101
Biological Process	GO:0022607	cellular component assembly	IGI	J:129101
Biological Process	GO:0021702	cerebellar Purkinje cell differentiation	IMP	J:123471
Biological Process	GO:0021549	cerebellum development	IMP	J:123471
Biological Process	GO:0010669	epithelial structure maintenance	IGI	J:129101
Biological Process	GO:0001702	gastrulation with mouth forming second	IMP	J:81152
Biological Process	GO:0001942	hair follicle development	IGI	J:129101
Biological Process	GO:0060322	head development	IGI	J:98485
Biological Process	GO:0043973	histone H3-K4 acetylation	IMP	J:164497
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	ISO	J:164563
Biological Process	GO:0045647	negative regulation of erythrocyte differentiation	IMP	J:118839
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0007399	nervous system development	IBA	J:265628
Biological Process	GO:0030182	neuron differentiation	IEP	J:41553
Biological Process	GO:0045785	positive regulation of cell adhesion	IGI	J:129101
Biological Process	GO:0046985	positive regulation of hemoglobin biosynthetic process	IMP	J:164497
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:164497
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:328860
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:132709
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:41049
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:132709
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:132709
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:129101
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:41049
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IGI	J:147271
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:41049
Biological Process	GO:0060319	primitive erythrocyte differentiation	TAS	J:164497
Biological Process	GO:0030334	regulation of cell migration	IDA	J:229373
Biological Process	GO:0051893	regulation of focal adhesion assembly	IDA	J:229373
Biological Process	GO:0043549	regulation of kinase activity	IDA	J:229373
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IEA	J:72247
Biological Process	GO:0034243	regulation of transcription elongation by RNA polymerase II	IMP	J:164497
Biological Process	GO:0035019	somatic stem cell population maintenance	IGI	J:129101
Biological Process	GO:0006366	transcription by RNA polymerase II	IDA	J:98485
Biological Process	GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	IMP	J:164497
Biological Process	GO:0016055	Wnt signaling pathway	IMP	J:81152

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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