GO Annotations Graph

• Symbol: Hoxa13
• Name: homeobox A13
• ID: MGI:96173

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	IDA	J:239414
Molecular Function	GO:0003677	DNA binding	IDA	J:144018
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IDA	J:239414
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:107262
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:100763
Molecular Function	GO:0005515	protein binding	IPI	J:95882
Molecular Function	GO:0005515	protein binding	IPI	J:95882
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IMP	J:210876
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IMP	J:210876
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0043565	sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Molecular Function	GO:0000976	transcription cis-regulatory region binding	IDA	J:136953
Cellular Component	GO:0005694	chromosome	ISO	J:164563
Cellular Component	GO:0045111	intermediate filament cytoskeleton	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:96550
Cellular Component	GO:0005634	nucleus	IDA	J:95882
Cellular Component	GO:0005634	nucleus	IDA	J:95882
Biological Process	GO:0009653	anatomical structure morphogenesis	IMP	J:83431
Biological Process	GO:0009887	animal organ morphogenesis	IMP	J:54823
Biological Process	GO:0048844	artery morphogenesis	IMP	J:136953
Biological Process	GO:0060442	branching involved in prostate gland morphogenesis	IMP	J:54823
Biological Process	GO:0035115	embryonic forelimb morphogenesis	IMP	J:96550
Biological Process	GO:0048619	embryonic hindgut morphogenesis	ISO	J:155856
Biological Process	GO:0060847	endothelial cell fate specification	IMP	J:136953
Biological Process	GO:0001886	endothelial cell morphogenesis	IMP	J:136953
Biological Process	GO:0048839	inner ear development	IMP	J:136953
Biological Process	GO:0030539	male genitalia development	IMP	J:83431
Biological Process	GO:0097152	mesenchymal cell apoptotic process	IMP	J:83431
Biological Process	GO:0097152	mesenchymal cell apoptotic process	IMP	J:83431
Biological Process	GO:0140014	mitotic nuclear division	IMP	J:83431
Biological Process	GO:0140014	mitotic nuclear division	IMP	J:83431
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:2001055	positive regulation of mesenchymal cell apoptotic process	IMP	J:83431
Biological Process	GO:0045840	positive regulation of mitotic nuclear division	IMP	J:83431
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:241475
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IMP	J:136953
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:107262
Biological Process	GO:0030510	regulation of BMP signaling pathway	IMP	J:83431
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0001894	tissue homeostasis	IMP	J:136953
Biological Process	GO:0006366	transcription by RNA polymerase II	IDA	J:107262
Biological Process	GO:0001570	vasculogenesis	IMP	J:136953
Biological Process	GO:0003281	ventricular septum development	IMP	J:136953