Hoxd11 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Hoxd11
homeobox D11
MGI:96203

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0003677	DNA binding	IEA	J:72247
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Biological Process	GO:0048856	anatomical structure development	IBA	J:265628
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:84456
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:84456
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:84456
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:84456
Biological Process	GO:0001658	branching involved in ureteric bud morphogenesis	IGI	J:69851
Biological Process	GO:0060351	cartilage development involved in endochondral bone morphogenesis	IGI	J:90403
Biological Process	GO:0060351	cartilage development involved in endochondral bone morphogenesis	IGI	J:90403
Biological Process	GO:0048468	cell development	IGI	J:90403
Biological Process	GO:0048468	cell development	IGI	J:90403
Biological Process	GO:0002063	chondrocyte development	IGI	J:90403
Biological Process	GO:0002062	chondrocyte differentiation	IGI	J:90403
Biological Process	GO:0048589	developmental growth	IGI	J:90403
Biological Process	GO:0048589	developmental growth	IGI	J:90403
Biological Process	GO:0009953	dorsal/ventral pattern formation	IGI	J:69851
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:128015
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:36443
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:36443
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:84456
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:128015
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:128015
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:84456
Biological Process	GO:0035115	embryonic forelimb morphogenesis	IGI	J:191689
Biological Process	GO:0030326	embryonic limb morphogenesis	IGI	J:90403
Biological Process	GO:0060272	embryonic skeletal joint morphogenesis	IGI	J:167066
Biological Process	GO:0060272	embryonic skeletal joint morphogenesis	IGI	J:167066
Biological Process	GO:0001656	metanephros development	IGI	J:88686
Biological Process	GO:0001656	metanephros development	IGI	J:88686
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0001759	organ induction	IGI	J:88686
Biological Process	GO:0001759	organ induction	IGI	J:88686
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:1902761	positive regulation of chondrocyte development	IGI	J:90403
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	IGI	J:90403
Biological Process	GO:0032332	positive regulation of chondrocyte differentiation	IGI	J:90403
Biological Process	GO:0009954	proximal/distal pattern formation	IGI	J:84456
Biological Process	GO:0009954	proximal/distal pattern formation	IGI	J:84456
Biological Process	GO:0009954	proximal/distal pattern formation	IGI	J:84456
Biological Process	GO:0009954	proximal/distal pattern formation	IGI	J:84456
Biological Process	GO:0032330	regulation of chondrocyte differentiation	IGI	J:191689
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0010468	regulation of gene expression	IGI	J:198638
Biological Process	GO:0010468	regulation of gene expression	IGI	J:198638
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0007338	single fertilization	IGI	J:198638
Biological Process	GO:0007338	single fertilization	IGI	J:198638
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IMP	J:19630
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456
Biological Process	GO:0001501	skeletal system development	IGI	J:84456

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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