GO Annotations Graph

• Symbol: Hoxd13
• Name: homeobox D13
• ID: MGI:96205

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003682	chromatin binding	IDA	J:109528
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	IDA	J:239414
Molecular Function	GO:0003677	DNA binding	ISO	J:164563
Molecular Function	GO:0003677	DNA binding	IDA	J:144018
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IDA	J:107262
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:235252
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:107262
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:107262
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:155856
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	IDA	J:95882
Cellular Component	GO:0005634	nucleus	IDA	J:95882
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:15507
Biological Process	GO:0060602	branch elongation of an epithelium	IMP	J:39392
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:128015
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:36443
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:128015
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:128015
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:43310
Biological Process	GO:0042733	embryonic digit morphogenesis	IGI	J:36443
Biological Process	GO:0048619	embryonic hindgut morphogenesis	ISO	J:155856
Biological Process	GO:0030326	embryonic limb morphogenesis	IMP	J:75699
Biological Process	GO:0022612	gland morphogenesis	IMP	J:39392
Biological Process	GO:0035108	limb morphogenesis	IMP	J:71694
Biological Process	GO:0035108	limb morphogenesis	IGI	J:37211
Biological Process	GO:0030539	male genitalia development	IMP	J:15507
Biological Process	GO:0060571	morphogenesis of an epithelial fold	IMP	J:39392
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:0007389	pattern specification process	IMP	J:15507
Biological Process	GO:0007389	pattern specification process	IMP	J:75699
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:0007389	pattern specification process	IGI	J:36443
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:144018
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:107262
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:109528
Biological Process	GO:0060527	prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis	IGI	J:82540
Biological Process	GO:0060687	regulation of branching involved in prostate gland morphogenesis	IMP	J:39392
Biological Process	GO:0042127	regulation of cell population proliferation	IMP	J:75699
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0001501	skeletal system development	IMP	J:32603
Biological Process	GO:0001501	skeletal system development	IMP	J:15507
Biological Process	GO:0001501	skeletal system development	IMP	J:15507
Biological Process	GO:0006366	transcription by RNA polymerase II	IDA	J:107262