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GO Annotations Graph
Symbol
Name
ID
Hoxd3
homeobox D3
MGI:96207

GO annotations  (Text View)    (Tabular View)

A table of the annotations represented in this image is provided below.


Gene Ontology Evidence Code Abbreviations:

Experimental:
EXP
Inferred from experiment
HMP
Inferred from high throughput mutant phenotype
HGI
Inferred from high throughput genetic interaction
HDA
Inferred from high throughput direct assay
HEP
Inferred from high throughput expression pattern
IDA
Inferred from direct assay
IEP
Inferred from expression pattern
IGI
Inferred from genetic interaction
IMP
Inferred from mutant phenotype
IPI
Inferred from physical interaction
Homology:
IAS
Inferred from ancestral sequence
IBA
Inferred from biological aspect of ancestor
IBD
Inferred from biological aspect of descendant
IKR
Inferred from key residues
IMR
Inferred from missing residues
IRD
Inferred from rapid divergence
ISA
Inferred from sequence alignment
ISM
Inferred from sequence model
ISO
Inferred from sequence orthology
ISS
Inferred from sequence or structural similarity
Automated:
IEA
Inferred from electronic annotation
RCA
Reviewed computational analysis
Other:
IC
Inferred by curator
NAS
Non-traceable author statement
ND
No biological data available
TAS
Traceable author statement

CategoryGO IDClassification TermEvidenceReference
Molecular FunctionGO:0003677DNA bindingIEAJ:60000
Molecular FunctionGO:0003677DNA bindingIEAJ:72247
Molecular FunctionGO:0001228DNA-binding transcription activator activity, RNA polymerase II-specificISOJ:164563
Molecular FunctionGO:0003700DNA-binding transcription factor activityIEAJ:72247
Molecular FunctionGO:0000981DNA-binding transcription factor activity, RNA polymerase II-specificIBAJ:265628
Molecular FunctionGO:0000978RNA polymerase II cis-regulatory region sequence-specific DNA bindingIBAJ:265628
Molecular FunctionGO:0000977RNA polymerase II transcription regulatory region sequence-specific DNA bindingISOJ:164563
Molecular FunctionGO:1990837sequence-specific double-stranded DNA bindingISOJ:164563
Cellular ComponentGO:0016235aggresomeISOJ:164563
Cellular ComponentGO:0016604nuclear bodyISOJ:164563
Cellular ComponentGO:0005654nucleoplasmISOJ:164563
Cellular ComponentGO:0005654nucleoplasmTASReactome:R-MMU-5619427
Cellular ComponentGO:0005634nucleusIBAJ:265628
Biological ProcessGO:0009952anterior/posterior pattern specificationIBAJ:265628
Biological ProcessGO:0009952anterior/posterior pattern specificationIMPJ:19447
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:19447
Biological ProcessGO:0009952anterior/posterior pattern specificationIMPJ:15678
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0009952anterior/posterior pattern specificationIGIJ:45337
Biological ProcessGO:0051216cartilage developmentIGIJ:45337
Biological ProcessGO:0051216cartilage developmentIGIJ:45337
Biological ProcessGO:0051216cartilage developmentIGIJ:45337
Biological ProcessGO:0051216cartilage developmentIGIJ:45337
Biological ProcessGO:0051216cartilage developmentIGIJ:45337
Biological ProcessGO:0051216cartilage developmentIGIJ:45337
Biological ProcessGO:0007160cell-matrix adhesionISOJ:164563
Biological ProcessGO:0006351DNA-templated transcriptionISOJ:164563
Biological ProcessGO:0048704embryonic skeletal system morphogenesisIBAJ:265628
Biological ProcessGO:0048704embryonic skeletal system morphogenesisIMPJ:19447
Biological ProcessGO:0048704embryonic skeletal system morphogenesisIGIJ:19447
Biological ProcessGO:0048704embryonic skeletal system morphogenesisIMPJ:15678
Biological ProcessGO:0021615glossopharyngeal nerve morphogenesisIGIJ:45337
Biological ProcessGO:0021615glossopharyngeal nerve morphogenesisIGIJ:45337
Biological ProcessGO:0007275multicellular organism developmentIEAJ:60000
Biological ProcessGO:0007219Notch signaling pathwayISOJ:164563
Biological ProcessGO:0010628positive regulation of gene expressionISOJ:164563
Biological ProcessGO:0045666positive regulation of neuron differentiationIGIJ:131060
Biological ProcessGO:0045944positive regulation of transcription by RNA polymerase IIISOJ:164563
Biological ProcessGO:0006355regulation of DNA-templated transcriptionIEAJ:72247
Biological ProcessGO:0006357regulation of transcription by RNA polymerase IIIBAJ:265628
Biological ProcessGO:0030878thyroid gland developmentIGIJ:46523

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory