Hoxd9 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Hoxd9
homeobox D9
MGI:96210

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IDA	J:41205
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IBA	J:265628
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:41205
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA	J:72247
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0005730	nucleolus	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Biological Process	GO:0008344	adult locomotory behavior	IGI	J:59070
Biological Process	GO:0009952	anterior/posterior pattern specification	IBA	J:265628
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:31476
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:31476
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:31476
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:59070
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:31476
Biological Process	GO:0006351	DNA-templated transcription	IEA	J:72247
Biological Process	GO:0035115	embryonic forelimb morphogenesis	IGI	J:31476
Biological Process	GO:0035115	embryonic forelimb morphogenesis	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IBA	J:265628
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IGI	J:59070
Biological Process	GO:0035136	forelimb morphogenesis	IGI	J:59070
Biological Process	GO:0035137	hindlimb morphogenesis	IGI	J:59070
Biological Process	GO:0030879	mammary gland development	IGI	J:52279
Biological Process	GO:0030879	mammary gland development	IGI	J:52279
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0048935	peripheral nervous system neuron development	IGI	J:59070
Biological Process	GO:0048935	peripheral nervous system neuron development	IGI	J:59070
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:41205
Biological Process	GO:0009954	proximal/distal pattern formation	IBA	J:265628
Biological Process	GO:0009954	proximal/distal pattern formation	IMP	J:31476
Biological Process	GO:0009954	proximal/distal pattern formation	IGI	J:31476
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0010468	regulation of gene expression	IGI	J:198638
Biological Process	GO:0010468	regulation of gene expression	IGI	J:198638
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0007338	single fertilization	IGI	J:198638
Biological Process	GO:0007338	single fertilization	IGI	J:198638
Biological Process	GO:0007519	skeletal muscle tissue development	IGI	J:59070
Biological Process	GO:0007519	skeletal muscle tissue development	IGI	J:59070

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24