Hoxd9 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Hoxd9
homeobox D9
MGI:96210

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IDA	J:41205
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IBA	J:265628
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:41205
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA	J:72247
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0005730	nucleolus	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IBA	J:265628
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Cellular Component	GO:0005634	nucleus	IDA	J:9875
Biological Process	GO:0008344	adult locomotory behavior	IGI	J:59070
Biological Process	GO:0009952	anterior/posterior pattern specification	IBA	J:265628
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:31476
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:31476
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:31476
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:59070
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:124112
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:31476
Biological Process	GO:0006351	DNA-templated transcription	IEA	J:72247
Biological Process	GO:0035115	embryonic forelimb morphogenesis	IGI	J:31476
Biological Process	GO:0035115	embryonic forelimb morphogenesis	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IMP	J:31476
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048706	embryonic skeletal system development	IGI	J:124112
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IBA	J:265628
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	IGI	J:59070
Biological Process	GO:0035136	forelimb morphogenesis	IGI	J:59070
Biological Process	GO:0035137	hindlimb morphogenesis	IGI	J:59070
Biological Process	GO:0030879	mammary gland development	IGI	J:52279
Biological Process	GO:0030879	mammary gland development	IGI	J:52279
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0048935	peripheral nervous system neuron development	IGI	J:59070
Biological Process	GO:0048935	peripheral nervous system neuron development	IGI	J:59070
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:41205
Biological Process	GO:0009954	proximal/distal pattern formation	IBA	J:265628
Biological Process	GO:0009954	proximal/distal pattern formation	IMP	J:31476
Biological Process	GO:0009954	proximal/distal pattern formation	IGI	J:31476
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0010468	regulation of gene expression	IGI	J:198638
Biological Process	GO:0010468	regulation of gene expression	IGI	J:198638
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0007338	single fertilization	IGI	J:198638
Biological Process	GO:0007338	single fertilization	IGI	J:198638
Biological Process	GO:0007519	skeletal muscle tissue development	IGI	J:59070
Biological Process	GO:0007519	skeletal muscle tissue development	IGI	J:59070

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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