GO Annotations Graph

• Symbol: Nid1
• Name: nidogen 1
• ID: MGI:97342

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0005509	calcium ion binding	IEA	J:72247
Molecular Function	GO:0005518	collagen binding	ISO	J:164563
Molecular Function	GO:0005518	collagen binding	IDA	J:124538
Molecular Function	GO:0050840	extracellular matrix binding	IDA	J:139122
Molecular Function	GO:0005201	extracellular matrix structural constituent	RCA	J:265607
Molecular Function	GO:0005201	extracellular matrix structural constituent	RCA	J:265604
Molecular Function	GO:0043236	laminin binding	ISO	J:164563
Molecular Function	GO:0043237	laminin-1 binding	IDA	J:124538
Molecular Function	GO:0005515	protein binding	IPI	J:207441
Molecular Function	GO:0005515	protein binding	IPI	J:248454
Molecular Function	GO:0005515	protein binding	IPI	J:37650
Molecular Function	GO:0005515	protein binding	IPI	J:73852
Molecular Function	GO:0043394	proteoglycan binding	ISO	J:164563
Molecular Function	GO:0042813	Wnt receptor activity	IBA	J:265628
Molecular Function	GO:0017147	Wnt-protein binding	IBA	J:265628
Cellular Component	GO:0005604	basement membrane	NAS	J:320094
Cellular Component	GO:0005604	basement membrane	ISO	J:164563
Cellular Component	GO:0005604	basement membrane	IDA	J:98797
Cellular Component	GO:0005604	basement membrane	IDA	J:98797
Cellular Component	GO:0005604	basement membrane	IPI	J:79202
Cellular Component	GO:0005604	basement membrane	IDA	J:98797
Cellular Component	GO:0005604	basement membrane	IDA	J:27732
Cellular Component	GO:0005604	basement membrane	IDA	J:128304
Cellular Component	GO:0005604	basement membrane	IDA	J:98797
Cellular Component	GO:0005604	basement membrane	IDA	J:98797
Cellular Component	GO:0005604	basement membrane	IPI	J:79202
Cellular Component	GO:0005604	basement membrane	IDA	J:139122
Cellular Component	GO:0005604	basement membrane	IDA	J:86627
Cellular Component	GO:0005604	basement membrane	IDA	J:108496
Cellular Component	GO:0005604	basement membrane	IDA	J:77264
Cellular Component	GO:0005604	basement membrane	IPI	J:79202
Cellular Component	GO:0005604	basement membrane	IDA	J:98797
Cellular Component	GO:0005604	basement membrane	TAS	J:64030
Cellular Component	GO:0005604	basement membrane	IDA	J:81999
Cellular Component	GO:0005604	basement membrane	IDA	J:66122
Cellular Component	GO:0005604	basement membrane	IDA	J:98797
Cellular Component	GO:0005604	basement membrane	IPI	J:79202
Cellular Component	GO:0005604	basement membrane	IPI	J:79202
Cellular Component	GO:0071944	cell periphery	IDA	J:150519
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HDA	J:213088
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HDA	J:265604
Cellular Component	GO:0062023	collagen-containing extracellular matrix	HDA	J:265607
Cellular Component	GO:0031012	extracellular matrix	IDA	J:108466
Cellular Component	GO:0031012	extracellular matrix	IDA	J:108466
Cellular Component	GO:0031012	extracellular matrix	IDA	J:108466
Cellular Component	GO:0031012	extracellular matrix	IDA	J:108466
Cellular Component	GO:0005576	extracellular region	IEA	J:60000
Cellular Component	GO:0005576	extracellular region	TAS	Reactome:R-MMU-2426496
Cellular Component	GO:0005576	extracellular region	TAS	Reactome:R-MMU-2426528
Cellular Component	GO:0005576	extracellular region	TAS	Reactome:R-MMU-2533958
Cellular Component	GO:0005576	extracellular region	TAS	Reactome:R-NUL-2533964
Cellular Component	GO:0005576	extracellular region	TAS	Reactome:R-NUL-2533972
Cellular Component	GO:0098637	protein complex involved in cell-matrix adhesion	NAS	J:320095
Biological Process	GO:0060070	canonical Wnt signaling pathway	IBA	J:265628
Biological Process	GO:0007155	cell adhesion	IEA	J:60000
Biological Process	GO:0007160	cell-matrix adhesion	IDA	J:79202
Biological Process	GO:0030198	extracellular matrix organization	IDA	J:139122
Biological Process	GO:0032836	glomerular basement membrane development	IMP	J:86627
Biological Process	GO:0045785	positive regulation of cell adhesion	NAS	J:320337
Biological Process	GO:0010811	positive regulation of cell-substrate adhesion	IDA	J:139122
Biological Process	GO:2001046	positive regulation of integrin-mediated signaling pathway	NAS	J:207441
Biological Process	GO:0051149	positive regulation of muscle cell differentiation	NAS	J:320093
Biological Process	GO:0110011	regulation of basement membrane organization	NAS	J:320696