Snai1 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Snai1
snail family zinc finger 1
MGI:98330

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IEA	J:60000
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IDA	J:86131
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IDA	J:119938
Molecular Function	GO:0070888	E-box binding	ISO	J:164563
Molecular Function	GO:0019900	kinase binding	ISO	J:164563
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:183217
Molecular Function	GO:0005515	protein binding	IPI	J:184115
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IDA	J:86131
Molecular Function	GO:0043565	sequence-specific DNA binding	IDA	J:48573
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	ISO	J:164563
Cellular Component	GO:0005737	cytoplasm	IDA	J:84387
Cellular Component	GO:0005829	cytosol	ISO	J:164563
Cellular Component	GO:0001650	fibrillar center	ISO	J:164563
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	ISO	J:164563
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-9756411
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-9756452
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-9759738
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-9759753
Cellular Component	GO:0005634	nucleus	IDA	J:165329
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:84387
Cellular Component	GO:0005634	nucleus	IDA	J:97750
Cellular Component	GO:0005634	nucleus	IDA	J:128085
Cellular Component	GO:0005721	pericentric heterochromatin	ISO	J:164563
Cellular Component	GO:0005721	pericentric heterochromatin	IDA	J:206163
Biological Process	GO:0060536	cartilage morphogenesis	IGI	J:121243
Biological Process	GO:0010631	epithelial cell migration	IGI	J:121243
Biological Process	GO:0001837	epithelial to mesenchymal transition	IMP	J:177252
Biological Process	GO:0001837	epithelial to mesenchymal transition	IDA	J:60189
Biological Process	GO:0001837	epithelial to mesenchymal transition	ISO	J:164563
Biological Process	GO:0001837	epithelial to mesenchymal transition	IMP	J:72861
Biological Process	GO:0003198	epithelial to mesenchymal transition involved in endocardial cushion formation	IGI	J:139512
Biological Process	GO:0031069	hair follicle morphogenesis	IDA	J:97750
Biological Process	GO:0070828	heterochromatin organization	IMP	J:206163
Biological Process	GO:0060972	left/right pattern formation	IMP	J:111702
Biological Process	GO:0007498	mesoderm development	IMP	J:111702
Biological Process	GO:0001707	mesoderm formation	IMP	J:72861
Biological Process	GO:0007275	multicellular organism development	IEA	J:60000
Biological Process	GO:0060806	negative regulation of cell differentiation involved in embryonic placenta development	IDA	J:48573
Biological Process	GO:0043518	negative regulation of DNA damage response, signal transduction by p53 class mediator	ISO	J:164563
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	IDA	J:60189
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	IDA	J:84387
Biological Process	GO:1902230	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	ISO	J:164563
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IMP	J:84387
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IMP	J:60189
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IDA	J:86131
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IDA	J:48573
Biological Process	GO:0010957	negative regulation of vitamin D biosynthetic process	ISO	J:164563
Biological Process	GO:0061314	Notch signaling involved in heart development	IGI	J:165329
Biological Process	GO:0030335	positive regulation of cell migration	IMP	J:165329
Biological Process	GO:0030335	positive regulation of cell migration	ISO	J:164563
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	IDA	J:84387
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ISO	J:164563
Biological Process	GO:0010718	positive regulation of epithelial to mesenchymal transition	ISO	J:164563
Biological Process	GO:0010718	positive regulation of epithelial to mesenchymal transition	IMP	J:206163
Biological Process	GO:0010718	positive regulation of epithelial to mesenchymal transition	IMP	J:165329
Biological Process	GO:2000810	regulation of bicellular tight junction assembly	ISO	J:164563
Biological Process	GO:0006355	regulation of DNA-templated transcription	IBA	J:265628
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IGI	J:48573
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IGI	J:48573
Biological Process	GO:0060021	roof of mouth development	IGI	J:121243
Biological Process	GO:0060707	trophoblast giant cell differentiation	IDA	J:48573

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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