GO Annotations Graph

• Symbol: Sox1
• Name: SRY (sex determining region Y)-box 1
• ID: MGI:98357

GO annotations

A table of the annotations represented in this image is provided below.

• Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
• Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
• Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
• Graph generated Fri Mar 10 20:53:16 2023.

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Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP Inferred from experiment

HMP Inferred from high throughput mutant phenotype

HGI Inferred from high throughput genetic interaction

HDA Inferred from high throughput direct assay

HEP Inferred from high throughput expression pattern

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

Homology:

IAS Inferred from ancestral sequence

IBA Inferred from biological aspect of ancestor

IBD Inferred from biological aspect of descendant

IKR Inferred from key residues

IMR Inferred from missing residues

IRD Inferred from rapid divergence

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

Automated:

IEA Inferred from electronic annotation

RCA Reviewed computational analysis

Other:

IC Inferred by curator

NAS Non-traceable author statement

ND No biological data available

TAS Traceable author statement

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Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003677	DNA binding	IDA	J:90645
Molecular Function	GO:0003677	DNA binding	IDA	J:31475
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	IDA	J:46636
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0005515	protein binding	IPI	J:90645
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:46636
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0043565	sequence-specific DNA binding	IDA	J:46636
Cellular Component	GO:0005634	nucleus	IDA	J:46636
Cellular Component	GO:0005634	nucleus	IDA	J:46636
Cellular Component	GO:0005634	nucleus	IDA	J:46636
Biological Process	GO:0009653	anatomical structure morphogenesis	IBA	J:265628
Biological Process	GO:0030154	cell differentiation	IBA	J:265628
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	IDA	J:163558
Biological Process	GO:0030900	forebrain development	IMP	J:99610
Biological Process	GO:0021884	forebrain neuron development	IMP	J:99610
Biological Process	GO:0021884	forebrain neuron development	IMP	J:99610
Biological Process	GO:0021879	forebrain neuron differentiation	IMP	J:99610
Biological Process	GO:1904936	interneuron migration	IMP	J:164670
Biological Process	GO:0002089	lens morphogenesis in camera-type eye	IMP	J:46636
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IMP	J:90645
Biological Process	GO:0007399	nervous system development	IEA	J:72247
Biological Process	GO:0001764	neuron migration	IMP	J:99610
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IDA	J:46636
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0006355	regulation of DNA-templated transcription	IEA	J:72247
Biological Process	GO:0048713	regulation of oligodendrocyte differentiation	IMP	J:155627
Biological Process	GO:0021521	ventral spinal cord interneuron specification	IMP	J:164670