Yy1 GO Annotations Graph

GO Annotations Graph

Symbol
Name
ID

Yy1
YY1 transcription factor
MGI:99150

GO annotations (Text View) (Tabular View)

A table of the annotations represented in this image is provided below.

Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Black arrows indicate "regulates"; Green arrows indicate "positively_regulates"; Red arrows indicate "negatively_regulates"
Experimental annotations are indicated by darker-colored nodes; other annotations by lighter-colored nodes
Clicking on any node links to the MGI GO browser and information on all genes annotated to the term or its subterms.
Graph generated Fri Mar 10 20:53:16 2023.

Gene Ontology Evidence Code Abbreviations:

Experimental:

EXP: Inferred from experiment
HMP: Inferred from high throughput mutant phenotype
HGI: Inferred from high throughput genetic interaction
HDA: Inferred from high throughput direct assay
HEP: Inferred from high throughput expression pattern
IDA: Inferred from direct assay
IEP: Inferred from expression pattern
IGI: Inferred from genetic interaction
IMP: Inferred from mutant phenotype
IPI: Inferred from physical interaction

Homology:

IAS: Inferred from ancestral sequence
IBA: Inferred from biological aspect of ancestor
IBD: Inferred from biological aspect of descendant
IKR: Inferred from key residues
IMR: Inferred from missing residues
IRD: Inferred from rapid divergence
ISA: Inferred from sequence alignment
ISM: Inferred from sequence model
ISO: Inferred from sequence orthology
ISS: Inferred from sequence or structural similarity

Automated:

IEA: Inferred from electronic annotation
RCA: Reviewed computational analysis

Other:

IC: Inferred by curator
NAS: Non-traceable author statement
ND: No biological data available
TAS: Traceable author statement

Category	GO ID	Classification Term	Evidence	Reference
Molecular Function	GO:0003682	chromatin binding	IDA	J:211907
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0003677	DNA binding	IDA	J:92276
Molecular Function	GO:0003677	DNA binding	ISO	J:174127
Molecular Function	GO:0003677	DNA binding	IDA	J:81715
Molecular Function	GO:0003677	DNA binding	IDA	J:94257
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0003700	DNA-binding transcription factor activity	IDA	J:75034
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA	J:265628
Molecular Function	GO:0140297	DNA-binding transcription factor binding	ISO	J:164563
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IDA	J:196266
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	IDA	J:229793
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	ISO	J:164563
Molecular Function	GO:0000400	four-way junction DNA binding	ISO	J:164563
Molecular Function	GO:0046872	metal ion binding	IEA	J:60000
Molecular Function	GO:0005515	protein binding	IPI	J:128527
Molecular Function	GO:0005515	protein binding	IPI	J:195518
Molecular Function	GO:0005515	protein binding	IPI	J:150349
Molecular Function	GO:0005515	protein binding	IPI	J:227377
Molecular Function	GO:0005515	protein binding	IPI	J:119650
Molecular Function	GO:0005515	protein binding	IPI	J:119650
Molecular Function	GO:0003723	RNA binding	ISO	J:174127
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	ISO	J:164563
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA	J:265628
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	J:119650
Molecular Function	GO:0043565	sequence-specific DNA binding	ISO	J:155856
Molecular Function	GO:0043565	sequence-specific DNA binding	IDA	J:202488
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	ISO	J:164563
Molecular Function	GO:0046332	SMAD binding	ISO	J:164563
Molecular Function	GO:0000976	transcription cis-regulatory region binding	ISO	J:51654
Cellular Component	GO:0000785	chromatin	IDA	J:229793
Cellular Component	GO:0005677	chromatin silencing complex	IDA	J:228292
Cellular Component	GO:0005737	cytoplasm	ISO	J:155856
Cellular Component	GO:0031011	Ino80 complex	ISO	J:164563
Cellular Component	GO:0016363	nuclear matrix	ISO	J:155856
Cellular Component	GO:0005654	nucleoplasm	TAS	Reactome:R-MMU-5619441
Cellular Component	GO:0005634	nucleus	ISO	J:155856
Cellular Component	GO:0005634	nucleus	ISO	J:164563
Cellular Component	GO:0005634	nucleus	IDA	J:51654
Cellular Component	GO:0005634	nucleus	IDA	J:168362
Cellular Component	GO:0031519	PcG protein complex	IBA	J:265628
Cellular Component	GO:0031519	PcG protein complex	IDA	J:109284
Cellular Component	GO:0031519	PcG protein complex	IDA	J:123395
Cellular Component	GO:0005667	transcription regulator complex	ISO	J:155856
Cellular Component	GO:0005667	transcription regulator complex	IBA	J:265628
Cellular Component	GO:0005667	transcription regulator complex	IDA	J:75034
Biological Process	GO:0009952	anterior/posterior pattern specification	IGI	J:109284
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:109284
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:109284
Biological Process	GO:0009952	anterior/posterior pattern specification	IMP	J:109284
Biological Process	GO:0030183	B cell differentiation	IMP	J:195518
Biological Process	GO:0048593	camera-type eye morphogenesis	IGI	J:109284
Biological Process	GO:0030154	cell differentiation	IEA	J:60000
Biological Process	GO:0071347	cellular response to interleukin-1	ISO	J:155856
Biological Process	GO:0034644	cellular response to UV	ISO	J:164563
Biological Process	GO:0006338	chromatin remodeling	ISO	J:164563
Biological Process	GO:0051276	chromosome organization	IMP	J:172975
Biological Process	GO:0006974	DNA damage response	ISO	J:164563
Biological Process	GO:0006974	DNA damage response	IMP	J:172975
Biological Process	GO:0006310	DNA recombination	IEA	J:60000
Biological Process	GO:0006281	DNA repair	IEA	J:60000
Biological Process	GO:0000724	double-strand break repair via homologous recombination	ISO	J:164563
Biological Process	GO:0010467	gene expression	IDA	J:202488
Biological Process	GO:0030097	hemopoiesis	IMP	J:195518
Biological Process	GO:0071707	immunoglobulin heavy chain V-D-J recombination	IMP	J:195518
Biological Process	GO:0061052	negative regulation of cell growth involved in cardiac muscle cell development	ISO	J:155856
Biological Process	GO:0010629	negative regulation of gene expression	ISO	J:164563
Biological Process	GO:0032688	negative regulation of interferon-beta production	ISO	J:164563
Biological Process	GO:1902894	negative regulation of miRNA transcription	IDA	J:229793
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IDA	J:196266
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:155856
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ISO	J:51654
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	IDA	J:51654
Biological Process	GO:0045739	positive regulation of DNA repair	IDA	J:221224
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	ISO	J:164563
Biological Process	GO:0010628	positive regulation of gene expression	IDA	J:201967
Biological Process	GO:1904507	positive regulation of telomere maintenance in response to DNA damage	IMP	J:221224
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ISO	J:155856
Biological Process	GO:0051726	regulation of cell cycle	ISO	J:164563
Biological Process	GO:0033044	regulation of chromosome organization	ISO	J:164563
Biological Process	GO:0006282	regulation of DNA repair	IDA	J:221224
Biological Process	GO:0006275	regulation of DNA replication	ISO	J:164563
Biological Process	GO:0060382	regulation of DNA strand elongation	ISO	J:164563
Biological Process	GO:0006355	regulation of DNA-templated transcription	ISO	J:155856
Biological Process	GO:0006355	regulation of DNA-templated transcription	IDA	J:75034
Biological Process	GO:0045995	regulation of embryonic development	IMP	J:221224
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	ISO	J:164563
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	IBA	J:265628
Biological Process	GO:0010225	response to UV-C	ISO	J:164563
Biological Process	GO:0010225	response to UV-C	IMP	J:172975
Biological Process	GO:0006403	RNA localization	IMP	J:174127
Biological Process	GO:0007283	spermatogenesis	IMP	J:155000
Biological Process	GO:0000723	telomere maintenance	IMP	J:221224

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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