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Mammalian Phenotype Ontology Annotations
Query Results - Summary
Symbol
Name
ID 		Pax9
paired box 9
MGI:97493
84 phenotypes from 5 alleles in 10 genetic backgrounds
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Allelic Composition
Genetic Background		 Annotated Term Reference
Isl1tm1(cre)Sev/Isl1+
Pax9tm1Rbal/Pax9tm1.1Hpt
involves: 129 * C57BL/6J 		aberrant origin of the right subclavian artery J:311535
abnormal common carotid artery morphology J:311535
normal craniofacial phenotype J:311535
double outlet right ventricle J:311535
ectopic thymus J:311535
interrupted aortic arch J:311535
preaxial polydactyly J:311535
thymus hypoplasia J:311535
ventricular septal defect J:311535
Pax9tm1.1Hpt/Pax9tm1.1Hpt
involves: 129S2/SvPas * C57BL/6 * SJL 		no abnormal phenotype detected J:125026
Pax9tm1.1Hpt/Pax9tm1.1Hpt
H2az2Tg(Wnt1-cre)11Rth/H2az2+
involves: 129S2/SvPas * C57BL/6 * CBA * SJL 		abnormal maxillary shelf morphology J:125026
abnormal palatine bone horizontal plate morphology J:125026
absent alveolar process J:125026
absent mandibular coronoid process J:125026
absent premaxilla J:125026
absent teeth J:125026
aphagia J:125026
arrest of tooth development J:125026
cleft secondary palate J:125026
failure of palatal shelf elevation J:125026
neonatal lethality, complete penetrance J:125026
Pax9tm1.1Hpt/Pax9tm1.1Hpt
Tg(Pgk1-cre)1Lni/?
involves: 129S2/SvPas * BALB/c * C57BL/6 * SJL 		abnormal maxillary shelf morphology J:125026
abnormal palatine bone horizontal plate morphology J:125026
abnormal thymus lobule morphology J:125026
absent mandibular coronoid process J:125026
absent parathyroid glands J:125026
absent premaxilla J:125026
absent teeth J:125026
aphagia J:125026
cleft secondary palate J:125026
neonatal lethality, complete penetrance J:125026
polydactyly J:125026
tympanic ring hypoplasia J:125026
Pax9tm1.2(Osr2)Jian/Pax9+
involves: 129S1/Sv * 129S4/SvJaeSor * C57BL/6J * FVB/N 		normal craniofacial phenotype J:173121
Pax9tm1.3(Osr2)Jian/Pax9tm1.3(Osr2)Jian
involves: 129S1/Sv * C57BL/6J 		normal mortality/aging J:173121
normal reproductive system phenotype J:173121
Pax9tm1Hpt/Pax9tm1Hpt
involves: 129S2/SvPas * C57BL/6 		abnormal dentin morphology J:104121
abnormal molar morphology J:104121
abnormal tooth attrition J:104121
abnormal tooth development J:104121
abnormal tooth morphology J:104121
absent lower incisors J:104121
decreased molar number J:104121
decreased tooth number J:104121
normal endocrine/exocrine gland phenotype J:104121
failure of tooth eruption J:104121
Pax9tm1Hpt/Pax9tm1Rbal
involves: 129 * C57BL/6 * CD-1 		abnormal ameloblast morphology J:104121
abnormal dentin development J:104121
abnormal molar morphology J:104121
abnormal tooth attrition J:104121
abnormal tooth development J:104121
absent enamel J:104121
absent lower incisors J:104121
arrest of tooth development J:104121
decreased body size J:104121
decreased molar number J:104121
decreased tooth number J:104121
normal endocrine/exocrine gland phenotype J:104121
failure of tooth eruption J:104121
growth retardation of molars J:104121
postnatal lethality, incomplete penetrance J:104121
Pax9tm1Rbal/Pax9tm1Rbal
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 		abnormal autopod muscle morphology J:49857
abnormal cranium morphology J:49857
abnormal laryngeal cartilage morphology J:49857
abnormal limb development J:49857
abnormal mandible morphology J:49857
abnormal palatal shelf elevation J:49857
abnormal palatal shelf morphology J:49857
abnormal pharyngeal pouch morphology J:49857
abnormal pterygoid process morphology J:49857
abnormal Reichert's cartilage morphology J:49857
abnormal tendon morphology J:49857
abnormal thyroid cartilage morphology J:49857
absent alveolar process J:49857
absent incisors J:49857
absent mandibular coronoid process J:49857
absent maxillary shelf J:49857
absent molars J:49857
absent palatine bone horizontal plate J:49857
absent parathyroid glands J:49857
absent Reichert cartilage J:49857
absent teeth J:49857
absent ultimobranchial body J:49857
arrest of tooth development J:49857
athymia J:49857
cleft secondary palate J:49857
decreased tympanic ring size J:49857
distended abdomen J:49857
neonatal lethality, complete penetrance J:49857
polydactyly J:49857
polysyndactyly J:49857
respiratory distress J:49857
Pax9tm1Rbal/Pax9tm1Rbal
involves: 129S1/Sv * 129X1/SvJ * CD-1 		aberrant origin of the right subclavian artery J:311535
abnormal aortic arch morphology J:311535
abnormal common carotid artery morphology J:311535
abnormal first pharyngeal arch artery morphology J:311535
abnormal fourth pharyngeal arch artery morphology J:311535
abnormal hyoid bone greater horn morphology J:311535
abnormal hyoid bone lesser horn morphology J:311535
abnormal hyoid bone morphology J:311535
abnormal inferior horn of thyroid cartilage morphology J:311535
abnormal second pharyngeal arch artery morphology J:311535
abnormal superior horn of thyroid cartilage morphology J:311535
abnormal third pharyngeal arch artery morphology J:311535
absent fourth pharyngeal arch artery J:311535
absent third pharyngeal arch artery J:311535
cleft palate J:311535
decreased neural crest cell number J:311535
double outlet right ventricle J:311535
ectopic thymus J:311535
fourth pharyngeal arch artery hypoplasia J:311535
fused tracheal cartilage rings J:311535
interrupted aortic arch J:311535
neonatal lethality J:311535
preaxial polydactyly J:311535
third pharyngeal arch artery hypoplasia J:311535
thymus hypoplasia J:311535
ventricular septal defect J:311535
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/12/2024
MGI 6.24 		The Jackson Laboratory