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Mammalian Phenotype Ontology Annotations
Query Results - Summary
Symbol
Name
ID 		Rarb
retinoic acid receptor, beta
MGI:97857
127 phenotypes from multigenic genotypes
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Allelic Composition
Genetic Background		 Annotated Term Reference
Raratm1Ipc/Rara+
Rarbtm1Ipc/Rarb+
involves: 129S2/SvPas 		abnormal alisphenoid bone morphology J:21009
abnormal Harderian gland development J:21009
abnormal incus morphology J:21009
abnormal incus short process morphology J:21009
absent nasolacrimal duct J:21009
short fibula J:21009
Raratm1Ipc/Rara+
Rarbtm1Mma/Rarbtm1Mma
involves: 129S2/SvPas * C57BL/6 		abnormal skeleton morphology J:43344
abnormal sternum morphology J:43344
cervical vertebral transformation J:43344
fusion of atlas and odontoid process J:43344
split cervical axis J:43344
Raratm1Ipc/Raratm1Ipc
Rarbtm1Ipc/Rarb+
involves: 129S2/SvPas 		abnormal renal tubule morphology J:21034
abnormal respiratory system morphology J:21034
absent fetal ductus arteriosus J:21034
absent nephrogenic zone J:21034
ectopic kidney J:21034
perimembraneous ventricular septal defect J:21034
persistent right dorsal aorta J:21034
persistent truncus arteriosus J:21034
pulmonary hypoplasia J:21034
renal glomerulus hypertrophy J:21034
renal hypoplasia J:21034
Raratm1Ipc/Raratm1Ipc
Rarbtm1Ipc/Rarbtm1Ipc
involves: 129S2/SvPas 		abnormal alisphenoid bone morphology J:21009
abnormal aortic valve cusp morphology J:21034
abnormal cervical atlas morphology J:21009
abnormal cervical axis morphology J:21009
abnormal cervical vertebrae morphology J:21009
abnormal cricoid cartilage morphology J:21034
abnormal esophageal epithelium morphology J:21034
abnormal female reproductive system morphology J:21034
abnormal incus morphology J:21009
abnormal incus short process morphology J:21009
abnormal interventricular septum membranous part morphology J:21034
abnormal kidney development J:52599
abnormal left lung morphology J:21034
abnormal left major bronchus morphology J:21034
abnormal nephrogenic mesenchyme morphogenesis J:52599
abnormal occipital bone morphology J:21009
abnormal pulmonary artery morphology J:21034
abnormal renal tubule morphology J:21034
abnormal respiratory system morphology J:21034
abnormal right lung accessory lobe morphology J:21034
abnormal right lung morphology J:21034
abnormal right major bronchus morphology J:21034
abnormal sixth pharyngeal arch artery morphology J:21034
abnormal skeleton morphology J:21009
abnormal stomach epithelium morphology J:21034
abnormal thyroid cartilage morphology J:21034
abnormal tracheal cartilage morphology J:21034
abnormal ureter morphology J:21034
absent anal canal J:21034
absent cranial vagina J:21034
absent fetal ductus arteriosus J:21034
absent Mullerian ducts J:21034
absent nephrogenic zone J:21034
absent oviduct J:21034
absent uterus J:21034
normal craniofacial phenotype J:21009
cricoid and tracheal cartilage fusion J:21034
decreased nephron number J:52599
ectopic kidney J:21034
ectopic parathyroid gland J:21034
ectopic ureter J:21034
ectopic ureteric bud J:52599
fusion of atlas and occipital bones J:21009
hydronephrosis J:21034
hydroureter J:21034
impaired branching involved in ureteric bud morphogenesis J:52599
neonatal lethality, complete penetrance J:21009, J:21034
persistent cervical thymus J:21034
persistent hyperplastic primary vitreous J:21009
persistent right dorsal aorta J:21034
persistent truncus arteriosus J:21034
renal glomerulus hypertrophy J:21034
renal hypoplasia J:21034
small kidney J:52599
tracheoesophageal fistula J:21034
Raratm1Ipc/Raratm1Ipc
Rarbtm1Mma/Rarb+
involves: 129S2/SvPas * C57BL/6 		abnormal incus morphology J:43344
abnormal skeleton morphology J:43344
abnormal temporal bone squamous part morphology J:43344
abnormal thyroid cartilage morphology J:43344
abnormal tracheal cartilage morphology J:43344
abnormal vertebrae morphology J:43344
cervical vertebral transformation J:43344
fusion of atlas and odontoid process J:43344
fusion of vertebral arches J:43344
split cervical atlas J:43344
split cervical axis J:43344
thoracic vertebral transformation J:43344
vertebral transformation J:43344
Raratm1Ipc/Raratm1Ipc
Rarbtm1Mma/Rarbtm1Mma
involves: 129S2/SvPas * C57BL/6 		abnormal arytenoid cartilage morphology J:43344
abnormal basioccipital bone morphology J:43344
abnormal cartilage morphology J:43344
abnormal conotruncus septation J:43344
abnormal cricoid cartilage morphology J:43344
abnormal gonial bone morphology J:43344
abnormal hypoglossal nerve morphology J:43344
abnormal incus morphology J:43344
abnormal inferior vena cava morphology J:43344
abnormal pulmonary artery morphology J:43344
abnormal skeleton morphology J:43344
abnormal stapes morphology J:43344
abnormal thymus morphology J:43344
abnormal thyroid cartilage morphology J:43344
abnormal tracheal cartilage morphology J:43344
abnormal ureter morphology J:43344
abnormal vertebrae morphology J:43344
abnormal vertebral arch morphology J:43344
abnormal xiphoid process morphology J:43344
absent anal canal J:43344
absent cranial vagina J:43344
absent hypoglossal canal J:43344
absent Mullerian ducts J:43344
absent oviduct J:43344
absent stapedial artery J:43344
absent stapes obturator foramen J:43344
absent uterus J:43344
cervical vertebral transformation J:43344
diaphragmatic hernia J:43344
ectopic ureter J:43344
fusion of atlas and occipital bones J:43344
fusion of atlas and odontoid process J:43344
fusion of vertebral arches J:43344
hydronephrosis J:43344
lumbar vertebral transformation J:43344
perinatal lethality, complete penetrance J:43344
persistent cervical thymus J:43344
persistent hyperplastic primary vitreous J:43344
persistent truncus arteriosus J:43344
pulmonary hypoplasia J:43344
renal hypoplasia J:43344
right aortic arch J:43344
short sublingual duct J:43344
split cervical atlas J:43344
split cervical axis J:43344
tracheoesophageal fistula J:43344
ventricular septal defect J:43344
vertebral transformation J:43344
Raratm2Ipc/Raratm2Ipc
Rarbtm1Ipc/Rarbtm1Ipc
involves: 129S2/SvPas 		abnormal alisphenoid bone morphology J:21009
abnormal cardiovascular system morphology J:21034
abnormal female reproductive system morphology J:21034
abnormal fourth pharyngeal arch artery morphology J:21034
abnormal incus morphology J:21009
abnormal incus short process morphology J:21009
abnormal renal tubule morphology J:21034
abnormal respiratory system morphology J:21034
abnormal sixth pharyngeal arch artery morphology J:21034
abnormal skeleton morphology J:21034
abnormal thyroid cartilage morphology J:21034
abnormal tracheal cartilage morphology J:21034
abnormal ureter morphology J:21034
absent cranial vagina J:21034
absent nephrogenic zone J:21034
absent uterus J:21034
normal craniofacial phenotype J:21009
cricoid and tracheal cartilage fusion J:21034
ectopic cartilage J:21034
ectopic kidney J:21034
ectopic parathyroid gland J:21034
ectopic ureter J:21034
hydronephrosis J:21034
hydroureter J:21034
neonatal lethality, complete penetrance J:21009, J:21034
perimembraneous ventricular septal defect J:21034
persistent hyperplastic primary vitreous J:21009
persistent right dorsal aorta J:21034
renal glomerulus hypertrophy J:21034
renal hypoplasia J:21034
rudimentary Mullerian ducts J:21034
Rarbtm1Ipc/Rarbtm1Ipc
Rargtm1Ipc/Rargtm1Ipc
involves: 129S2/SvPas 		abnormal cervical atlas morphology J:21009
abnormal cervical axis morphology J:21009
abnormal cervical vertebrae morphology J:21009
abnormal conjunctival sac morphology J:21009
abnormal cornea stroma morphology J:21009
abnormal Harderian gland development J:21009
abnormal lacrimal gland development J:21009
abnormal skeleton morphology J:21009
abnormal tracheal cartilage morphology J:21034
absent eye anterior chamber J:21009
absent nasolacrimal duct J:21009
cervical vertebral transformation J:21009
normal craniofacial phenotype J:21009
cricoid and tracheal cartilage fusion J:21034
fused bronchial cartilage rings J:21034
fusion of atlas and occipital bones J:21009
neonatal lethality, complete penetrance J:21009
optic nerve coloboma J:21009
perinatal lethality J:21034
persistent hyperplastic primary vitreous J:21009
retina coloboma J:21009
short sublingual duct J:21009
Rarbtm1Mma/Rarb+
Rargtm1Ipc/Rarg+
involves: 129S2/SvPas * C57BL/6 		absent metoptic pillar J:43344
persistent hyperplastic primary vitreous J:43344
Rarbtm1Mma/Rarb+
Rargtm1Ipc/Rargtm1Ipc
involves: 129S2/SvPas * C57BL/6 		abnormal basioccipital bone morphology J:43344
abnormal skeleton morphology J:43344
abnormal tracheal cartilage morphology J:43344
abnormal vertebrae morphology J:43344
absent Harderian gland J:43344
absent metoptic pillar J:43344
cervical vertebral transformation J:43344
cricoid and tracheal cartilage fusion J:43344
fusion of atlas and occipital bones J:43344
fusion of atlas and odontoid process J:43344
fusion of vertebral arches J:43344
narrow eye opening J:43344
persistent hyperplastic primary vitreous J:43344
split cervical axis J:43344
thoracic vertebral transformation J:43344
vertebral transformation J:43344
Rarbtm1Mma/Rarbtm1Mma
Rargtm1Ipc/Rarg+
involves: 129S2/SvPas * C57BL/6 		abnormal basioccipital bone morphology J:43344
abnormal skeleton morphology J:43344
abnormal sternum morphology J:43344
fusion of atlas and odontoid process J:43344
persistent hyperplastic primary vitreous J:43344
split cervical axis J:43344
Rarbtm1Mma/Rarbtm1Mma
Rargtm1Ipc/Rargtm1Ipc
involves: 129S2/SvPas * C57BL/6 		abnormal artery morphology J:43344
abnormal basioccipital bone morphology J:43344
abnormal cartilage morphology J:43344
abnormal conjunctival sac morphology J:43344
abnormal cornea stroma morphology J:43344
abnormal iris stroma morphology J:43344
abnormal lens fiber morphology J:43344
abnormal lens morphology J:43344
abnormal retina morphology J:43344
abnormal retina neuronal layer morphology J:43344
abnormal skeleton morphology J:43344
abnormal sternum morphology J:43344
abnormal tracheal cartilage morphology J:43344
abnormal ureter morphology J:43344
abnormal vertebrae morphology J:43344
abnormal vertebral arch morphology J:43344
abnormal vitreous body morphology J:43344
absent eye anterior chamber J:43344
absent Harderian gland J:43344
absent metoptic pillar J:43344
absent nasolacrimal duct J:43344
absent retina inner plexiform layer J:43344
absent sclera J:43344
cervical vertebral transformation J:43344
cricoid and tracheal cartilage fusion J:43344
ectopic ureter J:43344
ethmoturbinate hypoplasia J:43344
fusion of atlas and occipital bones J:43344
fusion of atlas and odontoid process J:43344
fusion of vertebral arches J:43344
hydronephrosis J:43344
iris coloboma J:43344
narrow eye opening J:43344
optic disk coloboma J:43344
perinatal lethality, complete penetrance J:43344
persistent hyperplastic primary vitreous J:43344
retina fold J:43344
short sublingual duct J:43344
split cervical axis J:43344
thoracic vertebral transformation J:43344
ventral rotation of lens J:43344
vertebral transformation J:43344
Rarbtm1Mma/Rarbtm1Mma
Rargtm4Ipc/Rargtm4Ipc
involves: 129S2/SvPas 		single kidney J:42773
Rarbtm1Vgi/Rarbtm1Vgi
Rxrbtm1Rev/Rxrbtm1Rev
involves: 129S1/Sv * 129S4/SvJae * 129X1/SvJ * C57BL/6 		abnormal excitatory postsynaptic potential J:51892
abnormal spatial learning J:51892
absent long-term depression J:51892
reduced long-term potentiation J:51892
Rarbtm2Ipc/Rarbtm2Ipc
Rargtm3Ipc/Rargtm3Ipc
H2az2Tg(Wnt1-cre)11Rth/H2az2+
involves: 129/Sv * C57BL/6 * SJL 		abnormal conjunctival sac morphology J:102847
abnormal eye development J:102847
decreased periocular mesenchyme apoptosis J:102847
decreased ventral retina size J:102847
persistent hyperplastic primary vitreous J:102847
ventral rotation of lens J:102847
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory