About   Help   FAQ
Mammalian Phenotype Ontology Annotations
Query Results - Summary
Symbol
Name
ID
T
brachyury, T-box transcription factor T
MGI:98472
76 phenotypes from 29 alleles in 23 genetic backgrounds
Export: Excel File
Allelic Composition
Genetic Background
Annotated Term Reference
Gt(ROSA)26Sortm1(Actb-T,-GFP)Dalco/Gt(ROSA)26Sortm1(Actb-T,-GFP)Dalco
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
no abnormal phenotype detected J:101977
T1Or/T1Or
involves: 101 * C3H
embryonic growth arrest J:5621
embryonic lethality during organogenesis, complete penetrance J:5621
T2Or/T2Or
involves: 101 * C3H
embryonic growth arrest J:5621
embryonic lethality during organogenesis, complete penetrance J:5621
T3Or/T3Or
involves: 101 * C3H
embryonic growth arrest J:5621
embryonic lethality during organogenesis, complete penetrance J:5621
T4J/T+
involves: BALB/cBy
short tail J:30778
T5J/T+
C57BL/6J-T5J/J
short tail J:78379
T5Or/T5Or
involves: 101 * C3H
embryonic growth arrest J:5621
embryonic lethality during organogenesis, complete penetrance J:5621
T6J/T+
involves: A/J * C57BL/6J
short tail J:78380
T6Or/T6Or
involves: 101 * C3H
embryonic growth arrest J:5621
embryonic lethality during organogenesis, complete penetrance J:5621
T7J/T+
C57BL/6J-T7J
short tail J:44446
T7J/T7J
involves: 129S2/SvPas * C57BL/6J
embryonic lethality between implantation and somite formation, complete penetrance J:44446
T8J/T+
C57BL/6J-Apoetm1Unc
short tail J:72464
T8J/T8J
C57BL/6J-Apoetm1Unc
prenatal lethality, complete penetrance J:72464
T9J/T+
C57BL/6J-T9J
short tail J:72463
T9J/T9J
C57BL/6J-T9J
prenatal lethality, complete penetrance J:72463
T11J/T+
C57BL/6J-T11J/GrsrJ
abnormal pelvic girdle bone morphology J:187215
abnormal tail development J:187215
absent anus J:187215
kinked tail J:187215
short tail J:187215
T24H/T+
involves: 101/H * C3H/HeH
short tail J:169366
T26H/T+
involves: 101/H * C3H/HeH
absent tail J:169366
T29H/T+
involves: BALB/c * TFH
perinatal lethality, incomplete penetrance J:62655
T33H/T+
involves: 101/H * C3H/HeH * TFH
perinatal lethality, incomplete penetrance J:62655
reduced male fertility J:62655
T34H/T+
involves: STOCK T34H * TFH
edema J:62655
perinatal lethality, incomplete penetrance J:62655
short tail J:62655
T39H/T+
involves: BALB/c * C3H/HeN
abnormal tail morphology J:63816
T40H/T+
involves: C3H/HeH * C57BL/6J
short tail J:93195
T40H/T40H
involves: C3H/HeH * C57BL/6J
absent notochord J:93195
T41H/T+
involves: 101/Rl * BALB/cOlaHsd * C3H/Rl
short tail J:93195
T41H/T41H
involves: 101/Rl * BALB/cOlaHsd * C3H/Rl
absent notochord J:93195
Tc-2H/T+
involves: 101/H * C3H/HeH
abnormal tail morphology J:85396
absent tail J:85396
preweaning lethality, incomplete penetrance J:85396
vestigial tail J:85396
Tc-2H/Tc-2H
involves: 101/H * C3H/HeH
prenatal lethality J:85396
Tc-3H/T+
involves: BALB/cOlaHsd * C3H/HeH
absent tail J:93195
Tc-3H/Tc-3H
involves: BALB/cOlaHsd * C3H/HeH
embryonic lethality, complete penetrance J:93195
incomplete somite formation J:93195
open neural tube J:93195
Tc/T+
mixed
abnormal neural tube morphology J:106412
abnormal spinal cord morphology J:106412
abnormal tail bud morphology J:106412
absent vertebrae J:106412
spina bifida occulta J:106412
split notochord J:106412
Tc/T+
Not Specified
abnormal bone ossification J:5003
abnormal cervical atlas morphology J:5003
abnormal cervical vertebrae morphology J:5003
abnormal nucleus pulposus morphology J:5003
abnormal odontoid process morphology J:5003
abnormal tail morphology J:5003, J:64262
abnormal vertebral arch development J:5003
absent tail J:5003, J:64262
cervical vertebral fusion J:5003
decreased presacral vertebrae number J:5003
fusion of vertebral arches J:5003
neonatal lethality, incomplete penetrance J:5003
postnatal lethality J:5003
rib fusion J:5003
short ribs J:5003
short tail J:5003, J:64262
thoracic vertebral fusion J:5003
vertebral fusion J:5003
Tc/Tc
mixed
abnormal limb bud morphology J:106412
abnormal neural tube morphology J:106412
absent somites J:106412
absent tail bud J:106412
caudal body truncation J:106412
embryonic lethality during organogenesis, complete penetrance J:106412
Tc/Tc
Not Specified
abnormal allantois morphology J:5003
abnormal embryo development J:5003
abnormal limb bud morphology J:5003
abnormal neural fold formation J:5003
abnormal neural tube morphology J:5003
absent forelimb buds J:5003
absent hindlimb buds J:5003
absent somites J:5003
absent tail bud J:5003
caudal body truncation J:5003
distended pericardium J:5003
embryonic lethality during organogenesis, incomplete penetrance J:5003
kinked neural tube J:5003
Th/T+
Not Specified
short tail J:13072
Th/Th
Not Specified
abnormal embryo development J:13072
embryonic lethality, complete penetrance J:13072
TJic/T+
Not Specified
short tail J:14257
TJic/TJic
Not Specified
decreased litter size J:14257
TM1Shao/T+
involves: C57BL/6J
curly tail J:166619
short tail J:166619
TM1Shao/TM1Shao
involves: C57BL/6J
embryonic lethality during organogenesis, complete penetrance J:166619
Ttm1(cre/ERT2)Hssk/T+
involves: C57BL/6J * C57BL/6NCrlj * CBA/JNCrlj * ICR
abnormal tail morphology J:194054
absent tail J:194054
curly tail J:194054
short tail J:194054
Ttm1(cre/ERT2)Hssk/Ttm1(cre/ERT2)Hssk
involves: C57BL/6J * C57BL/6NCrlj * CBA/JNCrlj * ICR
embryonic lethality, complete penetrance J:194054
TWis/T+
involves: A/J
absent tail J:9032
TWis/T+
Not Specified
abnormal neural tube morphology J:16412
abnormal rostral-caudal axis patterning J:16412
abnormal sacral vertebrae morphology J:16412
abnormal tail bud morphology J:16412
abnormal vertebral body morphology J:16412
absent notochord J:16412
absent vertebral body J:16412
decreased rib number J:16412
fusion of vertebral arches J:16412
incomplete caudal neuropore closure J:16412
short tail J:16412
thin tail J:16412
TWis/TWis
involves: A/J
embryonic lethality J:9032
TWis/TWis
Not Specified
abnormal axial mesoderm morphology J:78124
abnormal mesoderm development J:16412
abnormal notochord morphology J:78124
abnormal posterior primitive streak morphology J:16412
abnormal prechordal plate morphology J:16412
abnormal primitive streak formation J:16412, J:78124
abnormal spinal cord morphology J:16412
absent allantois J:78124
absent primitive node J:16412
absent somites J:16412
embryonic lethality between somite formation and embryo turning, complete penetrance J:16412, J:78124
Gt(ROSA)26Sor/Gt(ROSA)26Sor+
chimera involves: C57BL/6 or (129S6/SvEvTac x C57BL/6NCr)F1
abnormal tail development J:173434
truncated notochord J:173434
Gt(ROSA)26Sor/Gt(ROSA)26Sor+
chimera involves: C57BL/6 or (129S6/SvEvTac x C57BL/6NCr)F1
abnormal neural tube morphology J:173434
absent allantois J:173434
absent notochord J:173434
caudal body truncation J:173434
embryonic lethality during organogenesis, complete penetrance J:173434
impaired somite development J:173434
Gt(ROSA)26Sor/Gt(ROSA)26Sor+
chimera involves: C57BL/6 or (129S6/SvEvTac x C57BL/6NCr)F1
abnormal mesoderm development J:173434
abnormal neural tube morphology J:173434
absent allantois J:173434
absent notochord J:173434
caudal body truncation J:173434
embryonic lethality during organogenesis, complete penetrance J:173434
impaired somite development J:173434
truncated notochord J:173434

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
10/29/2024
MGI 6.24
The Jackson Laboratory