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pmk934 Probe Detail
Nucleotide
Probe/Clone
  • Name
    pmk934
  • Sequence Type
    cDNA
  • ID
    MGI:10101
  • Region Covered
    nucleotides +210-1576 of the ODC mRNA sequence
  • Child Clone
    pCR6
  • Vector Type
    Plasmid
  • Insert Site
    PstI
  • Insert Size
    1366bp
  • Synonyms
    pODC934
Source
  • Species
    mouse, laboratory
  • Strain
    M. spretus
  • Tissue
    kidney
Genes
Odc-rs1 ornithine decarboxylase, related sequence 1
Odc-rs10 ornithine decarboxylase, related sequence 10
Odc-rs12 ornithine decarboxylase, related sequence 12
Odc-rs13 ornithine decarboxylase, related sequence 13
Odc-rs2 ornithine decarboxylase, related sequence 2
Odc-rs5 ornithine decarboxylase, related sequence 5
Odc-rs6 ornithine decarboxylase, related sequence 6
Odc-rs7 ornithine decarboxylase, related sequence 7
Odc-rs8 ornithine decarboxylase, related sequence 8
Odc-rs9 ornithine decarboxylase, related sequence 9
Polymorphisms
J:9070 Stephenson DA, et al., Nucleic Acids Res. 1988 Feb 25;16(4):1642
Endonuclease Gene Allele Fragments Strains
BglII Odc-rs13 c absent C57BL/6JRos
m 2.7kb M. m. musculus
J:953 Richards-Smith BA, et al., Mamm Genome. 1992;2(4):215-32
Endonuclease Gene Allele Fragments Strains
BamHI Odc-rs1 a 7.2kb AKR/J
b 7.1kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BamHI Odc-rs2 b 10.6kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, SWR/J
d 11.3kb DBA/2J
BamHI Odc-rs5 a 17.0,9.0,0.5kb AKR/J
b 19.0,2.3,0.8kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BamHI Odc-rs7 b 6.7kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J
s 3.1kb SWR/J
BamHI Odc-rs8 a 6.0,3.9kb AKR/J, C3H/HeJ, SWR/J
b 13.5,3.3kb C57BL/6J
c 8.3kb BALB/cByJ, C57L/J
BamHI Odc-rs9 b 12.2kb AKR/J, BALB/cByJ, C57BL/6J, C57L/J, SWR/J
d 5.7kb C3H/HeJ, DBA/2J
BglII Odc-rs1 a 5.6kb AKR/J
b 2.1kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BglII Odc-rs5 a 6.5,2.2,2.05kb AKR/J
b 6.6,5.9,3.4,2.3kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BglII Odc-rs8 a 8.1,3.1kb AKR/J, C3H/HeJ, SWR/J
b 7.5kb C57BL/6J
c 11.2kb BALB/cByJ, C57L/J
EcoRI Odc-rs5 a 17.6,12.2,8.0kb AKR/J
b 11.7,8.4,8.8,6.3kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
EcoRI Odc-rs7 b 8.0kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J
s 7.7kb SWR/J
EcoRI Odc-rs8 a 3.9,2.4kb AKR/J, C3H/HeJ, SWR/J
b 4.0,2.4kb C57BL/6J
c 4.3kb BALB/cByJ, C57L/J
EcoRI Odc-rs12 a 9.3kb AKR/J, BALB/cByJ, C3H/HeJ, C57L/J
b 9.4kb C57BL/6J, DBA/2J, SWR/J
HindIII Odc-rs1 a 2.4kb AKR/J
b 2.3kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
HindIII Odc-rs2 b 1.8kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, SWR/J
d 1.9kb DBA/2J
HindIII Odc-rs5 a 8.9,8.4,6.4,1.7kb AKR/J
b 13.2,1.75,0.7kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
HindIII Odc-rs6 b 18.0kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, SWR/J
d 10.8kb DBA/2J
HindIII Odc-rs7 b 2.5kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J
s 1.4,3.3kb SWR/J
HindIII Odc-rs8 a 2.4,1.5kb AKR/J, C3H/HeJ, SWR/J
b 6.1,3.1,2.4kb C57BL/6J
HindIII Odc-rs12 a 6.6kb AKR/J, BALB/cByJ, C3H/HeJ, C57L/J
b 6.7kb C57BL/6J, DBA/2J, SWR/J
PvuII Odc-rs6 b 3.35kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, SWR/J
d 3.3kb DBA/2J
PvuII Odc-rs7 b 19.0kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J
s 0.9kb SWR/J
PvuII Odc-rs8 a 5.9kb AKR/J, C3H/HeJ, SWR/J
b 8.4,4.5kb C57BL/6J
c 9.2kb BALB/cByJ, C57L/J
SstI Odc-rs5 a 24.0,18.0,17.4,14.4,11.4,9.8,8.7,7.2kb AKR/J
b 22.0,19.0,16.6,9.1,8.5kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
SstI Odc-rs7 b 5.9kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J
s 3.3kb SWR/J
SstI Odc-rs8 a 5.4,5.2kb AKR/J, C3H/HeJ, SWR/J
b 5.3,3.4kb C57BL/6J
c 7.8kb BALB/cByJ, C57L/J
SstI Odc-rs9 b 2.2kb AKR/J, BALB/cByJ, C57BL/6J, C57L/J, SWR/J
d 2.5kb C3H/HeJ, DBA/2J
References
J:28597 Berger FG, et al., Androgen-regulated ornithine decarboxylase mRNAs of mouse kidney. J Biol Chem. 1984 Jun 25;259(12):7941-6
J:9070 Stephenson DA, et al., Identification of an X-linked member of the Odc gene family in the mouse. Nucleic Acids Res. 1988 Feb 25;16(4):1642
J:953 Richards-Smith BA, et al., Mapping of the mouse ornithine decarboxylase-related sequence family. Mamm Genome. 1992;2(4):215-32
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/12/2024
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