About   Help   FAQ
HOAT1 Probe Detail
Nucleotide
Probe/Clone
  • Name
    HOAT1
  • Sequence Type
    cDNA
  • ID
    MGI:10769
  • Insert Size
    2.0 kb
Source
  • Species
    human
Genes
Oat ornithine aminotransferase
Oat-rs1 ornithine aminotransferase related sequence 1
Oat-rs2 ornithine aminotransferase related sequence 2
Polymorphisms
J:515 Ramesh V, et al., Mamm Genome. 1992;3(1):17-22
Notes: Oat-rs1 is identified by a StuI RFLV (11 vs. 8.5 kb fragments). Oat-rs2 is identified by a StuI RFLV (4.2 vs. absence fragments) and an EcoRV RFLV (5.8 vs. 7.0 kb fragments).
Endonuclease Gene Allele Fragments Strains
EcoRV Oat-rs1 a 9.5,7.0,1.8kb C3H/HeJ, DBA/2J
b 9.5,5.8,1.8kb AKR/J, C57BL/6J
EcoRV Oat-rs2 a 9.5,7.0,1.8kb C3H/HeJ, DBA/2J
b 9.5,5.8,1.8kb AKR/J, C57BL/6J
StuI Oat-rs1 a 8.5,7.5,5.5kb C3H/HeJ, DBA/2J
b 11,7.5,5.5,4.2kb C57BL/6J
StuI Oat-rs2 a 8.5,7.5,5.5kb C3H/HeJ, DBA/2J
b 11.0,7.5,5.5,4.2kb C57BL/6J
J:22393 Bergsagel PL, et al., Gene. 1994 Dec 15;150(2):345-50
Notes: A 3.5kb EcoRI fragment was used for typings but the authors did not designate whether the fragment originated in M.spretus of NFS/N.
Endonuclease Gene Allele Fragments Strains
EcoRI Oat-rs1 n not given NFS/N
s not given M. spretus
References
J:515 Ramesh V, et al., Mapping of ornithine aminotransferase gene sequences to mouse chromosomes 7, X, and 3. Mamm Genome. 1992;3(1):17-22
J:22393 Bergsagel PL, et al., Sequence and expression of murine cDNAs encoding Xlr3a and Xlr3b, defining a new X-linked lymphocyte-regulated Xlr gene subfamily. Gene. 1994 Dec 15;150(2):345-50
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory