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HOAT1 Probe Detail
Nucleotide
Probe/Clone
  • Name
    HOAT1
  • Sequence Type
    cDNA
  • ID
    MGI:10769
  • Insert Size
    2.0 kb
Source
  • Species
    human
Genes
Oat ornithine aminotransferase
Oat-rs1 ornithine aminotransferase related sequence 1
Oat-rs2 ornithine aminotransferase related sequence 2
Polymorphisms
J:515 Ramesh V, et al., Mamm Genome. 1992;3(1):17-22
Notes: Oat-rs1 is identified by a StuI RFLV (11 vs. 8.5 kb fragments). Oat-rs2 is identified by a StuI RFLV (4.2 vs. absence fragments) and an EcoRV RFLV (5.8 vs. 7.0 kb fragments).
Endonuclease Gene Allele Fragments Strains
EcoRV Oat-rs1 a 9.5,7.0,1.8kb C3H/HeJ, DBA/2J
b 9.5,5.8,1.8kb AKR/J, C57BL/6J
EcoRV Oat-rs2 a 9.5,7.0,1.8kb C3H/HeJ, DBA/2J
b 9.5,5.8,1.8kb AKR/J, C57BL/6J
StuI Oat-rs1 a 8.5,7.5,5.5kb C3H/HeJ, DBA/2J
b 11,7.5,5.5,4.2kb C57BL/6J
StuI Oat-rs2 a 8.5,7.5,5.5kb C3H/HeJ, DBA/2J
b 11.0,7.5,5.5,4.2kb C57BL/6J
J:22393 Bergsagel PL, et al., Gene. 1994 Dec 15;150(2):345-50
Notes: A 3.5kb EcoRI fragment was used for typings but the authors did not designate whether the fragment originated in M.spretus of NFS/N.
Endonuclease Gene Allele Fragments Strains
EcoRI Oat-rs1 n not given NFS/N
s not given M. spretus
References
J:515 Ramesh V, et al., Mapping of ornithine aminotransferase gene sequences to mouse chromosomes 7, X, and 3. Mamm Genome. 1992;3(1):17-22
J:22393 Bergsagel PL, et al., Sequence and expression of murine cDNAs encoding Xlr3a and Xlr3b, defining a new X-linked lymphocyte-regulated Xlr gene subfamily. Gene. 1994 Dec 15;150(2):345-50
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/12/2024
MGI 6.24 		The Jackson Laboratory