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pEc-B4 Probe Detail
Nucleotide
Probe/Clone
  • Name
    pEc-B4
  • Sequence Type
    genomic
  • ID
    MGI:12101
  • Vector Type
    Plasmid
  • Insert Site
    BglII/BamHI
  • Insert Size
    537 bp
Source
  • Species
    virus
  • Tissue Description
    AKV murine leukemia virus
Genes
Emv11 endogenous ecotropic MuLV 11
Emv13 endogenous ecotropic MuLV 13
Emv14 endogenous ecotropic MuLV 14
Emv20 endogenous ecotropic MuLV 20
Emv21 endogenous ecotropic MuLV 21
Emv22 endogenous ecotropic MuLV 22
Emv23 endogenous ecotropic MuLV 23
Emv24 endogenous ecotropic MuLV 24
Emv25 endogenous ecotropic MuLV 25
Emv26 endogenous ecotropic MuLV 26
Emv27 endogenous ecotropic MuLV 27
Emv28 endogenous ecotropic MuLV 28
Emv29 endogenous ecotropic MuLV 29
Emv34 endogenous ecotropic MuLV 34
Emv35 endogenous ecotropic MuLV 35
Emv36 endogenous ecotropic MuLV 36
Emv37 endogenous ecotropic MuLV 37
Emv38 endogenous ecotropic MuLV 38
Emv39 endogenous ecotropic MuLV 39
Emv40 endogenous ecotropic MuLV 40
Emv41 endogenous ecotropic MuLV 41
Emv42 endogenous ecotropic MuLV 42
Emv43 endogenous ecotropic MuLV 43
Emv44 endogenous ecotropic MuLV 44
Emv45 endogenous ecotropic MuLV 45
Emv46 endogenous ecotropic MuLV 46
Emv47 endogenous ecotropic MuLV 47
Emv48 endogenous ecotropic MuLV 48
Emv49 endogenous ecotropic MuLV 49
Emv50 endogenous ecotropic MuLV 50
Emv51 endogenous ecotropic MuLV 51
Emv52 endogenous ecotropic MuLV 52
Emv53 endogenous ecotropic MuLV 53
Emv54 endogenous ecotropic MuLV 54
Emv55 endogenous ecotropic MuLV 55
Emv56 endogenous ecotropic MuLV 56
Emv57 endogenous ecotropic MuLV 57
Emv58 endogenous ecotropic MuLV 58
Emv59 endogenous ecotropic MuLV 59
Emv60 endogenous ecotropic MuLV 60
Emv61 endogenous ecotropic MuLV 61
Emv62 endogenous ecotropic MuLV 62
Myo5a myosin VA
Polymorphisms
J:10034 Taylor BA, et al., Genomics. 1989 Aug;5(2):221-32
Endonuclease Gene Allele Fragments Strains
HindIII Emv11 a 5.6kb AKR/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv13 a 18.5kb AKR/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv14 a 6.5kb AKR/J, MEV/1TyJ
b absent BXD32/TyJ, C57BL/6J, CAST/EiJ, SWR/J
HindIII Emv20 a 8.5kb C58/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv21 a 8.8kb C58/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv23 a 7.1kb C58/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv24 a 10.2kb C58/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv25 a 9.5kb C58/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv26 a 10.8kb C58/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Emv27 a 8.0kb C58/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
HindIII Myo5a a 6.7kb DBA/2J
b absent BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv11 a 4.3kb AKR/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv13 a 3.4kb AKR/J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv14 a 8.6kb AKR/J, MEV/1TyJ
b absent BXD32/TyJ, C57BL/6J, CAST/EiJ, SWR/J
PvuII Emv20 a 8.2kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv21 a 6.6kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv22 a 6.6kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv23 a 3.7kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv24 a 3.5kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv25 a 3.4kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv26 a 2.9kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv27 a 9.4kb C58/J, MEV/1TyJ
b absent AKXD14/TyJ, BXD32/TyJ, CAST/EiJ, SWR/J
PvuII Emv28 a 4.0kb MEV/1TyJ
b absent BXD32/TyJ, C57BL/6J, CAST/EiJ, SWR/J
PvuII Emv29 a 3.1kb MEV/1TyJ
b absent BXD32/TyJ, C57BL/6J, CAST/EiJ, SWR/J
PvuII Myo5a a 5.2kb DBA/2J, MEV/1TyJ
b absent BXD32/TyJ, CAST/EiJ, SWR/J
J:4958 Taylor BA, et al., Genomics. 1993 May;16(2):380-94
Notes: A 518bp fragment of pEC-B4 was amplified via PCR and used in Southern analysis.
Endonuclease Gene Allele Fragments Strains
PvuII Emv28 a 4.0kb MEV/Ty
b absent CAST/EiJ
PvuII Emv29 a 3.2kb MEV/Ty
b absent CAST/EiJ
PvuII Emv34 a 6.0kb MEV/Ty
b absent CAST/EiJ
PvuII Emv35 a 4.1kb MEV/Ty
b absent CAST/EiJ
PvuII Emv36 a 7.6kb MEV/Ty
b absent CAST/EiJ
PvuII Emv37 a 7.1kb MEV/Ty
b absent CAST/EiJ
PvuII Emv38 a 3.2kb MEV/Ty
b absent CAST/EiJ
PvuII Emv39 a 10.2kb MEV/Ty
b absent CAST/EiJ
PvuII Emv40 a 3.4kb MEV/Ty
b absent CAST/EiJ
PvuII Emv41 a 5.4kb MEV/Ty
b absent CAST/EiJ
PvuII Emv42 a 7.0kb MEV/Ty
b absent CAST/EiJ
PvuII Emv43 a 10.6kb MEV/Ty
b absent CAST/EiJ
PvuII Emv44 a 7.4kb MEV/Ty
b absent CAST/EiJ
PvuII Emv45 a 5.9kb MEV/Ty
b absent CAST/EiJ
PvuII Emv46 a 4.4kb MEV/Ty
b absent CAST/EiJ
PvuII Emv47 a 6.9kb MEV/Ty
b absent CAST/EiJ
PvuII Emv48 a 7.1kb MEV/Ty
b absent CAST/EiJ
PvuII Emv49 a 5.5kb MEV/Ty
b absent CAST/EiJ
PvuII Emv50 a 3.9kb MEV/Ty
b absent CAST/EiJ
PvuII Emv51 a 4.2kb MEV/Ty
b absent CAST/EiJ
PvuII Emv52 a 5.7kb MEV/Ty
b absent CAST/EiJ
PvuII Emv53 a 22.0kb MEV/Ty
b absent CAST/EiJ
PvuII Emv54 a 10.1kb MEV/Ty
b absent CAST/EiJ
PvuII Emv55 a 4.0kb MEV/Ty
b absent CAST/EiJ
PvuII Emv56 a 3.2kb MEV/Ty
b absent CAST/EiJ
PvuII Emv57 a 6.1kb MEV/Ty
b absent CAST/EiJ
PvuII Emv58 a 12.0kb MEV/Ty
b absent CAST/EiJ
PvuII Emv59 a 5.8kb MEV/Ty
b absent CAST/EiJ
PvuII Emv60 a 3.3kb MEV/Ty
b absent CAST/EiJ
PvuII Emv61 a 3.2kb MEV/Ty
b absent CAST/EiJ
PvuII Emv62 a 3.4kb MEV/Ty
b absent CAST/EiJ
J:22965 Li Y, et al., Cell. 1995 Feb 10;80(3):423-30
Endonuclease Gene Allele Fragments Strains
PvuII Emv27 b absent C57BL/6FrSe
m 9.4kb liMEV
References
J:10034 Taylor BA, et al., A mouse linkage testing stock possessing multiple copies of the endogenous ecotropic murine leukemia virus genome. Genomics. 1989 Aug;5(2):221-32
J:4958 Taylor BA, et al., The MEV mouse linkage testing stock: mapping 30 novel proviral insertions and establishment of an improved stock. Genomics. 1993 May;16(2):380-94
J:22965 Li Y, et al., A fibrillar collagen gene, Col11a1, is essential for skeletal morphogenesis [see comments]. Cell. 1995 Feb 10;80(3):423-30
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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06/12/2024
MGI 6.13 		The Jackson Laboratory