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pMm3-1 Probe Detail
Nucleotide
Probe/Clone
  • Name
    pMm3-1
  • Sequence Type
    genomic
  • ID
    MGI:13191
  • Parent Clone
    lambda-Mm3
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/Sau3A
  • Insert Size
    334 bp
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL/6J
Genes
Ms6hm minisatellite 6 hypermutable
Sequences
J04743 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
Polymorphisms
J:10137 Kelly R, et al., Genomics. 1989 Nov;5(4):844-56
Notes: Additional fragments are seen with some strains. Intra-strain variation is observed for this unstable minisatellite. C57BL/6J lacks a 3' AluI site that is present in DBA/2J.
Endonuclease Gene Allele Fragments Strains
AluI Ms6hm b 8.0,6.1kb C57BL/6J
d 3.7,3.8kb DBA/2J
HinfI Ms6hm a 2.5kb AKR
b 7kb C57BL/6J
c 16kb C57BL/6J
d 3.7kb CBA
e 7.8,8kb C3H/He
f 3.2kb BALB/c
g 6.6kb A
h 3.9,4.1kb SWR
i 4.2,4.3kb DBA/2J
Sau3A Ms6hm b 8.0,6.0kb C57BL/6J
d 4.0,3.8kb DBA/2J
References
J:10137 Kelly R, et al., Characterization of a highly unstable mouse minisatellite locus: evidence for somatic mutation during early development. Genomics. 1989 Nov;5(4):844-56
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/17/2024
MGI 6.24 		The Jackson Laboratory