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3' Otf3 probe Probe Detail
Nucleotide
Probe/Clone
  • Name
    3' Otf3 probe
  • Sequence Type
    cDNA
  • ID
    MGI:18176
  • Region Covered
    includes 7 amino acids of the POU homeobox
  • Insert Site
    AhaII/EcoRI
  • Insert Size
    442bp
Source
  • Species
    mouse, laboratory
Genes
Pou5f1-rs6 POU domain, class 5, transcription factor 1, related sequence 6
Pou5f1-rs5 POU domain, class 5, transcription factor 1, related sequence 5
Pou5f1-rs4 POU domain, class 5, transcription factor 1, related sequence 4
Pou5f1-rs1 POU domain, class 5, transcription factor 1, related sequence 1
Pou5f1 POU domain, class 5, transcription factor 1
Polymorphisms
J:11320 Siracusa LD, et al., Genomics. 1991 Jun;10(2):313-26
Notes: Only diagnostic fragment sizes given.
Endonuclease Gene Allele Fragments Strains
BamHI Pou5f1 a 6.1kb C3H/HeJ
b 5.1kb C57BL/6J
BamHI Pou5f1-rs1 a absent C3H/HeJ
b 6.8kb C57BL/6J
BamHI Pou5f1-rs6 a 4.1kb C3H/HeJ
b 4.2kb C57BL/6J
TaqI Pou5f1 b absent C57BL/6J
s 3.7kb M. spretus
TaqI Pou5f1-rs1 b 5.0kb C57BL/6J
s absent M. spretus
TaqI Pou5f1-rs1 a absent C3H/HeJ
b 5.0kb C57BL/6J
TaqI Pou5f1-rs4 b absent C57BL/6J
s 1.8kb M. spretus
TaqI Pou5f1-rs5 b absent C57BL/6J
s 2.1kb M. spretus
TaqI Pou5f1-rs6 b absent C57BL/6J
s 0.5kb M. spretus
TaqI Pou5f1-rs6 a 2.7kb C3H/HeJ
b 3.4kb C57BL/6J
References
J:11320 Siracusa LD, et al., Chromosomal location of the octamer transcription factors, Otf-1, Otf-2, and Otf-3, defines multiple Otf-3-related sequences dispersed in the mouse genome. Genomics. 1991 Jun;10(2):313-26
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/29/2024
MGI 6.24 		The Jackson Laboratory