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LS2 Probe Detail
Nucleotide
Probe/Clone
  • Name
    LS2
  • Sequence Type
    oligo
  • ID
    MGI:18631
  • Region Covered
    a portion of the coding region (CTTACATCTTTATCGGGCCAGAG)
  • Insert Size
    23bp
Source
  • Species
    mouse, laboratory
  • Strain
    BALB/c
  • Tissue
    pooled
  • Tissue Description
    thymus and B-lymphocytes
Genes
Iapls2-1 intracisternal A particle, lymphocyte specific 2-1
Iapls2-10 intracisternal A particle, lymphocyte specific 2-10
Iapls2-11 intracisternal A particle, lymphocyte specific 2-11
Iapls2-12 intracisternal A particle, lymphocyte specific 2-12
Iapls2-13 intracisternal A particle, lymphocyte specific 2-13
Iapls2-14 intracisternal A particle, lymphocyte specific 2-14
Iapls2-15 intracisternal A particle, lymphocyte specific 2-15
Iapls2-2 intracisternal A particle, lymphocyte specific 2-2
Iapls2-29 intracisternal A particle, lymphocyte specific 2-29
Iapls2-3 intracisternal A particle, lymphocyte specific 2-3
Iapls2-31 intracisternal A particle, lymphocyte specific 2-31
Iapls2-34 intracisternal A particle, lymphocyte specific 2-34
Iapls2-4 intracisternal A particle, lymphocyte specific 2-4
Iapls2-5 intracisternal A particle, lymphocyte specific 2-5
Iapls2-6 intracisternal A particle, lymphocyte specific 2-6
Iapls2-7 intracisternal A particle, lymphocyte specific 2-7
Iapls2-8 intracisternal A particle, lymphocyte specific 2-8
Iapls2-9 intracisternal A particle, lymphocyte specific 2-9
Iapls2-16 intracisternal A particle, lymphocyte specific 2-16
Iapls2-26 intracisternal A particle, lymphocyte specific 2-26
Iapls2-37 intracisternal A particle, lymphocyte specific 2-37
Iapls2-35 intracisternal A particle, lymphocyte specific 2-35
Iapls2-19 intracisternal A particle, lymphocyte specific 2-19
Iapls2-25 intracisternal A particle, lymphocyte specific 2-25
Iapls2-24 intracisternal A particle, lymphocyte specific 2-24
Iapls2-28 intracisternal A particle, lymphocyte specific 2-28
Iapls2-18 intracisternal A particle, lymphocyte specific 2-18
Iapls2-27 intracisternal A particle, lymphocyte specific 2-27
Iapls2-23 intracisternal A particle, lymphocyte specific 2-23
Iapls2-21 intracisternal A particle, lymphocyte specific 2-21
Iapls2-22 intracisternal A particle, lymphocyte specific 2-22
Iapls2-20 intracisternal A particle, lymphocyte specific 2-20
Iapls2-17 intracisternal A particle, lymphocyte specific 2-17
Iapls2-38 intracisternal A particle, lymphocyte specific 2-38
Polymorphisms
J:3879 Lueders KK, et al., Mamm Genome. 1993;4(2):69-77
Notes: The LS2 probe hybridizes to multiple Iapls loci. Alleles are a=presence, b=absence.
Endonuclease Gene Allele Fragments Strains
Not Specified Iapls2-1 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls2-2 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls2-3 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls2-4 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls2-5 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls2-6 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls2-7 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls2-8 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls2-9 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls2-10 a present C57BL/6By, C57BL/6J
b absent BALB/cBy, DBA/2J
Not Specified Iapls2-11 a present C57BL/6J
b absent DBA/2J
Not Specified Iapls2-12 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls2-13 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls2-14 a present DBA/2J
b absent C57BL/6J
Not Specified Iapls2-15 a present DBA/2J
b absent C57BL/6J
J:20038 Lueders KK, et al., Mamm Genome. 1994 Aug;5(8):473-8
Endonuclease Gene Allele Fragments Strains
HindIII Iapls2-1 b ~11.0kb C57BL/6J
s absent M. spretus
HindIII Iapls2-2 b ~6.7kb C57BL/6J
s absent M. spretus
HindIII Iapls2-5 b ~4.0kb C57BL/6J
s absent M. spretus
HindIII Iapls2-6 b ~3.5kb C57BL/6J
s absent M. spretus
HindIII Iapls2-10 b ~0.02kb C57BL/6J
s absent M. spretus
HindIII Iapls2-16 b ~3.6kb C57BL/6J
s absent M. spretus
J:22798 Lueders KK, Mamm Genome. 1995 Feb;6(2):134-6
Endonuclease Gene Allele Fragments Strains
HindIII Iapls2-10 b ~0.8kb C57BL/6J
d absent C57BLKS/J, DBA/2J
HindIII Iapls2-11 b ~0.7kb C57BL/6J
d absent C57BLKS/J, DBA/2J
HindIII Iapls2-13 b absent C57BL/6J
d ~4.2kb C57BLKS/J, DBA/2J
HindIII Iapls2-29 b absent C57BL/6J
d ~2.0kb C57BLKS/J, DBA/2J
HindIII Iapls2-31 b absent C57BL/6J, DBA/2J
d ~2.5kb C57BLKS/J
HindIII Iapls2-34 b absent C57BL/6J, DBA/2J
d ~3.2kb C57BLKS/J
J:24190 Lueders KK, Mouse Genome. 1995;93(1):161-163
Endonuclease Gene Allele Fragments Strains
HindIII Iapls2-1 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls2-2 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls2-3 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls2-6 b present C57BL/6J
h absent C3H/HeJ
HindIII Iapls2-17 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls2-28 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls2-34 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls2-35 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls2-37 b absent C57BL/6J
h present C3H/HeJ
HindIII Iapls2-38 b absent C57BL/6J
h present C3H/HeJ
J:24203 Lueders KK, Electrophoresis. 1995 Feb;16(2):179-85
Endonuclease Gene Allele Fragments Strains
Not Specified Iapls2-3 a absent A/J
b ~4.9kb C57BL/6J
Not Specified Iapls2-4 a absent A/J
b ~4.5kb C57BL/6J
Not Specified Iapls2-6 a present A/J
b absent C57BL/6J
Not Specified Iapls2-10 a absent A/J
b ~1.0kb C57BL/6J
Not Specified Iapls2-18 a ~21.0kb A/J
b absent C57BL/6J
Not Specified Iapls2-19 a ~22.0kb A/J
b absent C57BL/6J
Not Specified Iapls2-20 a ~7.0kb A/J
b absent C57BL/6J
Not Specified Iapls2-21 a ~5.2kb A/J
b absent C57BL/6J
Not Specified Iapls2-22 a ~2.2kb A/J
b absent C57BL/6J
Not Specified Iapls2-23 a ~1.8kb A/J
b absent C57BL/6J
Not Specified Iapls2-24 a ~1.5kb A/J
b absent C57BL/6J
Not Specified Iapls2-25 a ~4.4kb A/J
b absent C57BL/6J
Not Specified Iapls2-26 a 1.5kb A/J
b absent C57BL/6J
Not Specified Iapls2-27 a ~0.9kb A/J
b absent C57BL/6J
References
J:3879 Lueders KK, et al., Genomic mapping of intracisternal A-particle proviral elements. Mamm Genome. 1993;4(2):69-77
J:20038 Lueders KK, et al., Mapping of mouse intracisternal A-particle proviral markers in an interspecific backcross. Mamm Genome. 1994 Aug;5(8):473-8
J:22798 Lueders KK, Differences in intracisternal A-particle and GLN proviral loci suggest a genetic contribution from a DBA/2-like strain in generation of the C57BL/Ks strain. Mamm Genome. 1995 Feb;6(2):134-6
J:24190 Lueders KK, Mapping of mouse intracisternal A-particle proviral markers in the BXH RI series. Mouse Genome. 1995;93(1):161-163
J:24203 Lueders KK, Multilocus genomic mapping with intracisternal A-particle proviral oligonucleotide probes hybridized to mouse DNA in dried agarose gels. Electrophoresis. 1995 Feb;16(2):179-85
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/12/2024
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