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pMK217 Probe Detail
Nucleotide
Probe/Clone
  • Name
    pMK217
  • Sequence Type
    cDNA
  • ID
    MGI:19378
  • Region Covered
    nucleotides +169-738 of the ODC mRNA sequence
  • Vector Type
    Plasmid
  • Insert Size
    569bp
Source
  • Species
    mouse, laboratory
  • Tissue
    kidney
Genes
Odc-rs1 ornithine decarboxylase, related sequence 1
Odc-rs12 ornithine decarboxylase, related sequence 12
Odc-rs2 ornithine decarboxylase, related sequence 2
Odc-rs5 ornithine decarboxylase, related sequence 5
Odc-rs6 ornithine decarboxylase, related sequence 6
Odc-rs7 ornithine decarboxylase, related sequence 7
Odc-rs8 ornithine decarboxylase, related sequence 8
Polymorphisms
J:953 Richards-Smith BA, et al., Mamm Genome. 1992;2(4):215-32
Endonuclease Gene Allele Fragments Strains
BamHI Odc-rs1 a 7.2kb AKR/J
b 7.1kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BamHI Odc-rs5 a 17.0kb AKR/J
b 2.3,0.8kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BamHI Odc-rs8 a 6.0kb AKR/J, C3H/HeJ, SWR/J
b 13.5kb C57BL/6J
c 8.3kb BALB/cByJ, C57L/J
BglII Odc-rs1 a 5.6kb AKR/J
b 2.1kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BglII Odc-rs5 a 6.5,2.2,2.05kb AKR/J
b 6.6,5.9,3.4,2.3kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
BglII Odc-rs8 a 3.1kb AKR/J, C3H/HeJ, SWR/J
b 7.5kb C57BL/6J
c 11.2kb BALB/cByJ, C57L/J
EcoRI Odc-rs5 a 17.6,8.0kb AKR/J
b 8.8,6.3kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
EcoRI Odc-rs8 a 3.9kb AKR/J, C3H/HeJ, SWR/J
b 4.0kb C57BL/6J
c 4.3kb BALB/cByJ, C57L/J
EcoRI Odc-rs12 a 9.3kb AKR/J, BALB/cByJ, C3H/HeJ, C57L/J
b 9.4kb C57BL/6J, DBA/2J, SWR/J
HindIII Odc-rs1 a 2.4kb AKR/J
b 2.3kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
HindIII Odc-rs5 a 8.9,8.4,6.4kb AKR/J
b 13.2,1.1,0.7kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
HindIII Odc-rs6 b 18.0kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, SWR/J
d 10.8kb DBA/2J
HindIII Odc-rs7 d 2.5kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J
s 3.3kb SWR/J
HindIII Odc-rs12 a 6.6kb AKR/J, BALB/cByJ, C3H/HeJ, C57L/J
b 6.7kb C57BL/6J, DBA/2J, SWR/J
PvuII Odc-rs6 b 3.35kb AKR/J, BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, SWR/J
d 3.3kb DBA/2J
PvuII Odc-rs8 a 5.9kb AKR/J, C3H/HeJ, SWR/J
b 4.5kb C57BL/6J
c 9.2kb BALB/cByJ, C57L/J
SstI Odc-rs5 a 24.0,18.0,17.4,14.4,11.4,9.8,8.7,7.2kb AKR/J
b 22.0,19.0,16.6,9.1,8.5kb BALB/cByJ, C3H/HeJ, C57BL/6J, C57L/J, DBA/2J, SWR/J
SstI Odc-rs8 a 5.4kb AKR/J, C3H/HeJ, SWR/J
b 5.3kb C57BL/6J
c 7.8kb BALB/cByJ, C57L/J
References
J:953 Richards-Smith BA, et al., Mapping of the mouse ornithine decarboxylase-related sequence family. Mamm Genome. 1992;2(4):215-32
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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08/02/2024
MGI 6.24 		The Jackson Laboratory