About   Help   FAQ
subclone 9 Probe Detail
Nucleotide
Probe/Clone
  • Name
    subclone 9
  • Sequence Type
    cDNA
  • ID
    MGI:23453
  • Insert Site
    EcoRI
  • Insert Size
    800bp
  • Note
    Hybridizes to the 3' untranslated portion of Prn-p.
Source
  • Species
    mouse, laboratory
Genes
Prnp prion protein
Polymorphisms
J:9736 Carlson GA, et al., Mol Cell Biol. 1988 Dec;8(12):5528-40
Endonuclease Gene Allele Fragments Strains
BstEII Prnp a 5.7,3.5kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 15.7kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 5.7,3.5kb RIIIS/J
d 5.7,3.5kb MA/MyJ
e 5.7,3.5kb CAST/EiJ
f 12.2,3.5kb MOLF/EiJ
EcoRI Prnp a 4.2kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 9.4kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 4.2kb RIIIS/J
d 4.2kb MA/MyJ
e 9.7kb CAST/EiJ
f 4.2kb MOLF/EiJ
SacI Prnp a 10.9kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 12.9kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 12.9kb RIIIS/J
d 10.9kb MA/MyJ
e 12.9kb CAST/EiJ
f 12.9kb MOLF/EiJ
TaqI Prnp a 11.0kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 9.1kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 11.0kb RIIIS/J
d 13.5kb MA/MyJ
e 9.1kb CAST/EiJ
f 9.1kb MOLF/EiJ
XbaI Prnp a 3.6kb 129P3/J, A/J, ABP/LeJ, AEJ/GnLeJ, AKR/J, AU/SsJ, BALB/cJ, BNT/LeJ, BUB/BnJ, C3HeB/FeJ, C57BL/6J, C57BL/10Sn, C58/J, CBA/J, CE/J, DA/HuSnJ, DBA/1J, DBA/2J, DW/J, FL/1ReJ, FS/EiJ, HP/EiTyJ, HRS/J, LG/J, LP/J, LT/SvEi, NZB/BlNJ, NZW/LacJ, PERA/EiJ, PL/J, RSV/LeJ, SEA/GnJ, SEC/1ReJ, SF/CamEiJ, SJL/J, SK/CamEi, SM/J, ST/bJ, SWR/J, V/LeJ, WB/ReJ, WC/ReJ, YBR/EiJ
b 5.2kb BDP/J, I/LnJ, IM, IS/CamEi, JE/LeJ, P/J
c 5.2kb RIIIS/J
d 5.2kb MA/MyJ
e 5.2kb CAST/EiJ
f 5.2kb MOLF/EiJ
References
J:9736 Carlson GA, et al., Genetics and polymorphism of the mouse prion gene complex: control of scrapie incubation time. Mol Cell Biol. 1988 Dec;8(12):5528-40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory