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MTF#123 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#123
  • Sequence Type
    cDNA
  • ID
    MGI:3506006
  • Region Covered
    Nucleotides 680-1427 of GenBank Accession ID AF061270.
  • Vector Type
    Plasmid
  • Insert Site
    HindIII/XbaI
  • Insert Size
    0.747kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CCCAAGCTTGCCATCACAGGCACGCTCAGC and TGCTCTAGACCAGCCCGCTGATGTGTGAGG. Template sequence provided by Paul Gray:
    CTCGAGGTCGACGGTATCGATAAGCTTCCAGCATCAGCCCTACAACAGGGAAATGTAACC
    ATGGCAACAGTGGCAGGTGGCACAGTGTACCAGCCTGTCACCGTCGTCACTCCGCAAGGC
    CAAGTGGTCACGCAGGCNTTATCTCCTGGGACAATTAGGATCCANAACTCACAGCTGCAG
    TTGCAGTTGAACCAANACCTCAGCATCTTGCATCAAGAGGATGGCTCCTCCAANAACAAN
    AGGGGTGTCCTGCCNAAGCACGCCACCAACGTGATGCGGTCCTGGCTCTTTCAGCACATA
    GGGCATCCCTACCCAACANAGGATGAGAAAAAGCANATTGCTGCTCAAACNAATCTGACC
    CTGCTTCAAGTCAACAACTGGTTCATCAACGCGAGAANACNAATTCTCCAGCCAATGTTG
    GATTCCAGCTGCTCANAGACTCCAAAAACGAANAAAAAACCTGCTCANAACAGGCCAGTT
    CAAAGGTTTTGGCCANATTCTCTTGCATCAGGAGTGGCACAAGCAACACCCAGCGAGCTT
    GCCATGTCANAAGGTGCCGTTGTGACCATCACCACACCTGTAAACATGAATGTGGACAGC
    CTTCAGTCCCTGTCCTCANACGGGGCCACCCTGGCCGTACAGCAGGTCATGATGGCAGGG
    CAGAGTGAGGACGAGTCGGTGGATAGCACAGAGGATGAGGGCGGCGCCCTGGCGCCCTCA
    CACATCAGCGGGCTGGTCTAGAACTAGTGNATCCCCCGGGNTGCACGAATTCNATATCAA
    GCTTCCAGCATCAGCCCTACAACAGGGAAATGTNACCATGGCAACAGTGGCAGGTGGNAC
    AGTGTACCAGGCCTGTCACCGTCGTCACTCCGCAAGGCAAGTGGTCACGCAGGCATTATC
    TCCTGGNACATTAGGATCCANAACTCCAGCTGCGTTGCAGTTGANCCAGACNTCACATCT
    TGNATCAGAGAGGCTCTCAAAAAAAAAGGGGTCTGNNAAAACCCCCNACGTATGNGNCTG
    GTNTTCNCNNAGGATCCTCCCNNNAGANAAAAACNATGGTNCNANAATTGNCNGNTNNGT
    ACCNGGTNNNGCGGNAAAATNCT
  • Synonyms
    GUDMAP:5267 probe, GUDMAP:20533 probe, maprobe:86
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Pknox1 Pbx/knotted 1 homeobox
Expression
  • Assay Results
    67
Sequences
AF061270 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/09/2024
MGI 6.24 		The Jackson Laboratory