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MTF#180 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#180
  • Sequence Type
    cDNA
  • ID
    MGI:3506050
  • Region Covered
    Nucleotides 1009-1702 of GenBank Accession ID X80339.
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/HindIII
  • Insert Size
    0.693kb
  • Note
    Fragment was generated by PCR with primers CGCGGATCCGAGCATCCTCTCCCTCCTGTCC and CCCAAGCTTAGCCCTCTGCACAGAGGCAGC. Template sequence provided by Paul Gray:
    CCTCGAGGTCGACGGTATCGATAAGCTTAGCCCTCTGCACAGAGGCAGCCTACAGATAGG
    AGAGTTTCTGAGGAAGAACTGATGACATTTAGGAAAGCGGGTTTTCCCCCTCCCTCGTTG
    GTACACGTTTAGAGTTTGTCATAAAAATTAAAAAAACAAAACAAAACAAAACAAGAAAAC
    AATCACCAAAACCCCTATTAAATTTGACAAAAATAGTTGTATTACTAACATCGCTGCTAC
    CCTAACCGCCTCCCATAGAGAGCATTAAGACATTTAGGCACTTGTTTCCCTTGCTAATAC
    TGCTCTTTTATTTTAATCTACATAAAATTATTTAACACTAAATATGAAAAATGTAAACTT
    AATCTTCCCATCAAAAAACAGCTGTGATTATAGTTTTCCTATTTGTCTTAAGAAGGCAGC
    CAGTTCCCCTCACACTGAAGGTTTCTTGTTTTCATTATTTTGATCTCTCTTCATTTCCTT
    TTCCTCTTCCCTAAACCGTTTCTCCATAAATAAATTAAAAAAATAATTACAATCCAGCTG
    ATTTGTAATTTCTGTTCATTAAAAGAAGACGAGGAGGAGGAGGAAGAAGAGGTGGAATAA
    GGGACTACTGTAAAGGATGCCTGGGTTGCCCAGAACCAAGCCTGGCTGTTTTTGTTATTT
    CCTGACCTTTTAGTGGGAGGGGAAATGCAAGGGTATTAAGAGTTGGACAGGAGGGCGAGG
    ATGCTCGGATCCACTAGTTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTC
    CTTTAGTGAGGGTTAATTTCGAGCTTGGCGTAATCATGGTCATAGCTGTTTCCGGTGTGA
    ANTGTTATCCGCTCANATTCCCACAACATACGAGCCGGAAGCATAAGNGTAAAGCCGGGG
    GGNCTAAGANGGAGCTACTCNCATAATTGCGTGCGCTCANGGCCGCTTTCNGTCGGNAAC
    NGTCGGNNGCTGCNTNATGANCGCCANCCCNGGGAAAGCGGTTGGNATGGGGCCTTCGTT
    NCCGCNAAGAACCNNGCCCGGNNTCGGNGGGGNNGGNTCNCTCCNAAGGGGNANCGGTTC
    CCNAACGGGGNACCNGNAAAAN
  • Synonyms
    GUDMAP:5317 probe, GUDMAP:11814 probe, GUDMAP:20699 probe, maprobe:126
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Six1 sine oculis-related homeobox 1
Expression
  • Assay Results
    61
Sequences
X80339 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory