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MTF#1417 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#1417
  • Sequence Type
    cDNA
  • ID
    MGI:3506903
  • Region Covered
    Nucleotides 949-263 of GenBank Accession ID BC006700.
  • Vector Type
    Plasmid
  • Insert Size
    0.686kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers TATGGAGGCCTCTGCGAATTCC and CAGGCTGGACCTCAGGAAGTGG. Paul Gray provided two sequence files for this probe. Sequence 1:
    CGAGGTGGGGTCAAGGCTATTCATAGGTTTAGGAGCAGTCATCCCAAGTAGCACTGCTTG
    CTGCTTGTGGATAAACTGTCTAGTACACTTGAGTTTAATTCATCCTTGATATCAGTGAGG
    TCTCAAAAACCCATCAGAAAGTGTCTGGACTGCTGGCTCTAGCACCACAAAGCAAATCAA
    GTACATATTTTGATTTTGTATTTTAGCCTTGTTTTTATATGAAAACTATACGAAACGTAC
    ATTGGGACAATTATGTTTATGTGATTCATCTAATAGATTATGATGTAAAAACTATATTCA
    TCTTAAAATGTTTTCACCCTGTAGCTTGAGTACTGGGATTATAAGTATGAGTTGATGCTG
    TACCTGTTTAGTTTTAAAAGAGGTCATTAAGTCAGAACCTTTAATTTTGCTCACTTGACA
    TGGACTACCATGATGCATGTGGTAGAACTTTTGGTTCACAGCCATTGAAATCCCCTACAC
    AATGTTTTCCAGAAACCCCTTATGAATGCTCTTGAATGGAGACTTTATTTCAAATAAAAG
    CTGTGTTTCTTAAGGTCAGAACAATGCTGACAAGTTTTATCACTAAAGTCCACTTATCAG
    ACGCAAAATCTAGGCATGGTAACAAAATGAGGTCATTTTGAAGATGCAATGAAGGTGAGG
    GGAAATTATGTAAATATTAGCAAGCGAAGAATATTGGAACATTTTTCAANGGGTTACTAG
    CTTCNTTGTAGAGATGANGAAACAAAAGTGCCAGTGTTAGCAGGTGGGAAAGCTCATTCT
    ATTCTGCTTATAAACAACTTGAGTAGGCTGATCTATGTAATTAACGGAANCTCCTNTTCA
    GTATGCCCAGTATTACATTGTANGCTTGACNATTTTGTGTAACAANTATCNTTGNGNTCN
    GAATACNGGTTTATATCTTTGCCANGAGGCTGANTTGGNNNACTTAAAGTTTAAAANTCT
    GGGTTTATGTNTAAAAAATATTTTNAAAAAGNANTTTTTTGNAGCCTTAAAAAAAAAAAA
    AAAANACCGGGGGNNCNAGCTTTTCCCTTNANGNGGNTANTTTAGCTNGGANGGGCCGNTTTTNNCNNCGGGCGGGAAACCCGGNGTNCCCN Sequence 2:
    GGTCCGGAATTCCCGGGTCGACTATCCGTGGAAAATAGTTTCTCGTTGAAAACCTAGAAT
    TTCCAGTTTTATGTGGGCTTCTGTATAGCAGAGGCTAAGCATTGATTGCTAGATGGAAAG
    TCAGGGTGGCATAAACAGCACATCAACTTCACATCTTACAACAGATGCAGAGAAATACGA
    TAAACTTCCCATGCTTGGCTACAAGTGCTGTCAGAAATGAGACATTACCTGAAAGAAGAC
    TAAAATCAAATTAGAAAATGACAACTTTTGGGTTGAATATTAATACCTTACCCTGTTTTT
    ATTGGCTTGCTAGTTAATGTTTTATTCTGATTAATAAGTCTTTTTCTTTAACTGTTACAT
    GTTGTAGTGGCTAACTTGGCAGTTCTTTGTATATGTAGATATAAGATTTTTAAACAAATG
    ACAAGATCCTTGAGGTCCACAAGCCTATTTTGATGATTTGAAGCTTTCCAATGCACAGAT
    GGAGAGGATTTATAAGTTGTTTTAAAAATCTAGGCCAGGATTGTTTAAACCTTTTTTTGG
    GGTCAAGGCTATTCATAGGTTTAGGAGCAGTCATCCCAAGTAGCACTGCTTGCTGCTTGT
    GGATAAACTGTCTAGTACACTTGAGTTTAATTCATCCTTGATATCAGTGAGGTCTCNAAA
    ACCCATCAGGAAAGTGTCTGGGACTGCTGGCTCTAGCACCACAAAGCAAATCAAGTACAT
    ATTNTTGATTTTGGTATTTTAAGCCTNGTTTTTATATGAAAACTATACCAAACGTACATT
    NGGGANNACTATGNTTTATGTGNATTNNCCCTAAAAGATTANGATGTAAAAAACCANTAT
    TCATCTTAAAAAGNTTTTCCNCCTNNTAGCNTGGAGTACCNGGGATTNNAAGTNTGAGTT
    GAAGCCTNNACCCGGNTTAATTTTTAAAAGAAGGNCATTAAGNTNAGAANCCTTTAATTT
    TTTGCNTCCCTGGANATGGACTNACCATNNANGCANGTGGGNAAGAANCTTTTTGGGTCC
    NACCCCNTTGAAAACCCCCNNACCAAGTGTGTTCCNNAAAANCCCCTTTTNAANNNCCCT
    TGGAATGNGAANCTTTTTTNCANAAAAAANCNNNGNNTTTCCTAANGGCCNNAAAANGGG
    NNGAANNATTTTTTTCCCAATAAAGTCCCCTTTTAAAANGNCAAAAACTTNGGGGNGGGT
    AAANAAAATNAGGG
  • Synonyms
    GUDMAP:9332 probe, GUDMAP:9333 probe, maprobe:904
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Trim59 tripartite motif-containing 59
Expression
  • Assay Results
    67
Sequences
BC006700 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory