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MTF#1920 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#1920
  • Sequence Type
    cDNA
  • ID
    MGI:3507147
  • Region Covered
    Nucleotides 9307-10040 of GenBank Accession ID AF156529.
  • Vector Type
    Plasmid
  • Insert Size
    0.734kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers GAAGTGCTGGTCATGCAGTCC and GGCTCAGATGGCCTGTTTGTGG. Paul Gray provided two sequence files for this probe. Sequence 1:
    GGTCCGGATTCCCGGGTCGACTATCCGCAAGAAGCAAAACTCTGCTTGGCTAGAGAGATA
    CCTCTAGACCTCGTGTGCGTGCGCTCACACATGCACACACATGCTCGCAGGTGCACATGT
    GTGTTGTGACACAGGCACCTTAGGGCACTTAGTTAGGACCCACACTGTTTAGTCAGAAGG
    CCCCTAACCGTTCCCCTCTGCTCCAGGTGGAAACCGACTACTGCCTGCTGCTGGCTCTGC
    CCTGTGGCCGTGACCAGGAGGATGTGGTGAGCCAGACCGAGTCCCTCAAGGCTGCCTTCA
    TCACTTACCTGCAGGCCAAGCAAGCAGCAGGGATTATCAATGTCCCCAACCCTGGCTCCA
    ATCAGGTTGGTCATTGTCCCATCCCTACCACACAGGTANGACCAGTTTAGGGCTGGGCAG
    GAGGGCTGGTCTTCCGGTGGCATGGATATTTCTAGTACTAACCAGAGTACCCCAGGGGTT
    CCTGAAGGAGGTGGGCATGCAAGTAACATGGGTAATGGTCACCAGTTGCCCATTCCAGAG
    AAAGGAGGTAGGGGACAGCTAAGANGTGTAGTGTTGACCTTGAACTATAGAACTGGTGAC
    ATGGCACCATGCCCTGCAGGACCCTGTTAAGGCCTACCAGGCACAAGCATGGTGGGAGGG
    TCATGGAAGACAGTGGCTCCCACTTTCTCTCTCTCCTCCTCCTCCTCCAGNCTGGCTACG
    TGCTTCAGATCTTCCCACCCTGTGAGTTCTCCGAGAGTCACCTCTCCCGGCTGGCCCCTG
    ANCTCCTTGCCAGCATCTCCACATCTCTCCTCACCTCATGATGTCATTGCCNCNGNGTGA
    GGCTCTGAACGGTCGCCACCTCAGGCATTTTCCTGAGGCTCTGCTGCAAAAAAAAAAAAA
    AAAGCGNCGCTCTANAGANCAANCTANGTACCGTGCTNCGACGTCAAACNCTTCTAAGGG
    CCCCAAATNCANTCCCNGGCGNNGTTTNAACNNCGGGCTGGGAAAACCTGGGTTCCNACNN Sequence 2:
    GNTCNAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTGAAGTGCTGGTCATG
    CAGTCCGAGTACCGGTTGCACCCGTACACGGTTCCCCGGGCACGTGCGGATCATGGTGCA
    TCCACATGTGACTGCTGTCAGTGAACAGCCCAGGGCCACAGAGGGGGTGGTAAAGGTGCC
    ACCAGCCAACAAGGCCCCCCAGCAACTGGTGAAGGAAGCGGTTAAGACTTCAGATGCCAA
    AGCAGTCCCGGCCCCAGCCCCTGTCCCCGTCCCTGTCCCTGTCCCTACCCCTGCCCCGCC
    CCCTCATGGTGAAGCCCGCATTCTCACGGTCACCCCCAGCAGCCAGCTTCAGGGGCTGCC
    TCTGACCCCACCTGTGGTCGTAACCCACGGGGTGCAGATTGTGCACTCCAGTGGTGAGCT
    GTTCCAAGAANACAGGTACGGTGACGTCCGCACCTACCACGCCCCCGCTCAGCANCTCAC
    ACACACTCAGTTTCCTGTCGCCTCCTCCATCAGCCTAGCCTCCANGACCAAGACTTCTGC
    CCANGTGCCCCCTGAAGGTGAGNCCTTGCAGTCCACGCAGTCTGCACAGCCTGCCCCCTC
    TACGCAGGACATGTANCCTTATACCATCCTGCCCNCCGNCCNTGNCCNTCCCTTCCCAAN
    TTNAGCCAGNNCTTGCCCAAGNCAACCCGAAGGTGGCAAAGATTTCCCTAAAGGTCNTCN
    CAAANGAANTTNATNGGGGGGACNCTANNANCNGGGTNNGGGGGTTGGGAAGGANAGAAC
    TNCAGCCCTTNCTCAAGGANCTTTTCCCTCNACAANANANANGAGCACATTTNCTTTTAA
    GNNCNAAAGCCCCGGAANATNTTCACATNNGTAATAAAANTTANNGNGGGGCCCGNTATN
    TACCTTAANCTGGGGAATTTCCCGAAATCCTCCCGTGNTTACCCANAAANACCTTTTGGA
    NTGAGCAATTNAGACCTTNTGGAAANAATNCTTNCNNNATANGGGGGGTCTCTNCCCTTT
    ATNATNAGATTNTTTGGGCCGCNNACAGNCNNAANTGGGGGTGCAANANAAAANCNTGGG
    TTTTACCCCNCNGGNGGNGNGAAAAAATTTGTTNTNTANANCCGCCNCCTNAACCAAAAT
    TTTTCCCCCTNCNCNAACAATATATTANCCAGAAGNCCGCGNGATATNGGCANTNCAANG
    NAGGANGATTAANAATNNCCCNTNGGGGNNGGTGNGCCCCTTTTAAGATAGGNTGTTGAG
    AAACCTTANACACTCNANCATTTTANAATATTTGNGACNNANTTGGAGGAATTCANNATG
    GNCCCANGNNATTTTTCTNCCGNCNANGNGGGNAAAAAANCATTTGTTTCNTTTNGACGC
    CACNATTNCACTAANTAAANGNAAAACTCGGNGC
  • Synonyms
    GUDMAP:6686 probe, maprobe:1238
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Spen spen family transcription repressor
Expression
  • Assay Results
    44
Sequences
AF156529 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory