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Col9a3_riboprobe Probe Detail
Nucleotide
Probe/Clone
  • Name
    Col9a3_riboprobe
  • Sequence Type
    cDNA
  • ID
    MGI:6170160
  • Note
    This probe was generated by the Allen Institute for Brain Science. Copyright 2004 Allen Institute for Brain Science. Allen Mouse Brain Atlas. Available from: http://mouse.brain-map.org/. Copyright 2008 Allen Institute for Brain Science. Allen Developing Mouse Brain Atlas. Available from: http://developingmouse.brain-map.org. The probe was generated using PCR; its predicted amplicon based on the genome assembly at the time is:
    TAGAACTGGCGAGCTGGGTGAGGCTGGCCCCTCTGGAGAGCCAGGTATCCCTGGAGATGT
    TGGTGTTCCAGGGGAGCGTGGTGAGGCTGGTCACAGGGGCTCCGTGGGAGCTCTTGGCCC
    ACAAGGTCCTCCTGGTGCTCCTGGCATCCGTGGCTTTCAGGGACAAAAAGGCAGCACAGG
    AGACCCTGGCCTTCCGGGCCCCCAAGGCCTACGGGGAGATGTGGGTGACCGGGGTCCAGG
    AGGTGCCACAGGCCCTAAGGGAGACCAGGGCATTGCAGGTTCCGATGGTCTTCCAGGGGA
    CAAAGGCGAGCTGGGTCCTAATGGCCCCGTTGGACAAAAAGGAGAGTCTGGCAGCCGAGG
    GGAACTGGGCCCCAAAGGCATCCAGGGCCCCAATGGCACCAGTGGAGTCCAGGGTGTACC
    TGGTCCCCCAGGTCCACTGGGCCTCCAAGGTGTGCAGGGTGTCCCAGGCATCACCGGGAA
    GCCTGGAGTTCCGGGCAAGGAAGCCAGTGAACAGCGCATCAGGGAGCTATGCGGGGGTAT
    GATCAGTGAGCAAATTGCACAGTTGGCTGCACACCTGAGGAAGCCCTTAGCACCAGGCTC
    CATCGGCAGGCCTGGTCCAGCTGGCCCCCCAGGCCCTCCAGGCCCTCCAGGCTCTATTGG
    CCACCCTGGCGCTCGGGGTCCCCCTGGATACCGTGGTCCCACTGGGGAACTAGGAGATCC
    TGGACCAAGAGGGAGCCAGGGTGACAGAGGGGACAAGGGAGCAACAGGTGCAGGGCTGGA
    TGGGCCTGCTGGGGACCAGGGCTACCAAGGGCCTCAAGGTGTACCTGGCATCAGCAAAGA
    TGGTCGAGATGGTGCTCATGGTGAGCCTGGCCTTCCCGGTGATCCTGGCCTTCC
  • Synonyms
    RP_040929_01_D11, RP_050725_02_C10, RP_070219_01_B10, RP_080108_02_D08, RP_090724_01_G04, RP_100202_01_E07
Source
  • Species
    mouse, laboratory
Genes
Col9a3 collagen, type IX, alpha 3
Expression
  • Assay Results
    11
References
J:262123 Allen Institute for Brain Science, Allen Brain Atlas: mouse riboprobes. Allen Institute. 2004;
J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23
J:307862 Wilkerson BA, et al., Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris. Elife. 2021 May 18;10:e60108
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory