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Table pub.mgd.mld_contig
Defines CONTIG Experiment for MIT Physical Mapping data. Each Contig has a name and an indication (minLink) of the minimum number of common hits required to assemble YACs into the Contig. For the MIT data, the value in this field is either 1 or 2. Each Contig is labelled with the minimum and maximum cM position of markers within the Contig. When printing the Contigs for a chromosome, the Contigs should be ordered by the mincm field. The Contig tables are loaded via a load script and there is no Editorial Interface for modifying this data.

See MLD_ContigProbe, MLD_Hit, PRB_Probe.

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SchemaSpy
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Primary key columns
Columns with indexes
Excluded column relationships
< n > number of related tables
 
Column Type Size Nulls Auto Default Children Parents Comments
_contig_key int4 10
mld_contigprobe
primary key
_expt_key int4 10
mld_expts
foreign key to MLD_Expts
mincm numeric 131089  √  null minimum cM position of markers within the Contig
maxcm numeric 131089  √  null maximum cM position of markers within the Contig
name text 2147483647  √  null name of Contig
minlink int4 10  √  null indicates the minimum number of common hits required to assemble YACs into the Contig.
creation_date timestamp 29,6 now() date record was created
modification_date timestamp 29,6 now() date record was last modified

Table contained 2,054 rows at Mon Sep 11 06:12 EDT 2023

Indexes:
Column(s) Type Sort Anomalies
_contig_key Primary key, Used to cluster data Asc
name Must be unique Asc
_expt_key Performance Asc

Close relationships  within of separation: