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Mouse SNP Summary
Symbol
Name
ID
D5Mit299
DNA segment, Chr 5, Massachusetts Institute of Technology 299
MGI:100417

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218956947
MGI SNP Detail
Alliance Variant
Chr5:49420192 D5Mit299 1951 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs244079338
MGI SNP Detail
Alliance Variant
Chr5:49420222 D5Mit299 1921 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264422536
MGI SNP Detail
Alliance Variant
Chr5:49420232 D5Mit299 1911 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233996684
MGI SNP Detail
Alliance Variant
Chr5:49420250 D5Mit299 1893 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36313898
MGI SNP Detail
Alliance Variant
Chr5:49420290 D5Mit299 1853 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C T C
rs257132848
MGI SNP Detail
Alliance Variant
Chr5:49420336 D5Mit299 1807 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225946063
MGI SNP Detail
Alliance Variant
Chr5:49420378 D5Mit299 1765 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs37831636
MGI SNP Detail
Alliance Variant
Chr5:49420398 D5Mit299 1745 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/G G G G G G G C G G G G G G G G
rs212639083
MGI SNP Detail
Alliance Variant
Chr5:49420529 D5Mit299 1614 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234342124
MGI SNP Detail
Alliance Variant
Chr5:49420583 D5Mit299 1560 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259731241
MGI SNP Detail
Alliance Variant
Chr5:49420667 D5Mit299 1476 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219766058
MGI SNP Detail
Alliance Variant
Chr5:49420728 D5Mit299 1415 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs242604592
MGI SNP Detail
Alliance Variant
Chr5:49420780 D5Mit299 1363 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259830382
MGI SNP Detail
Alliance Variant
Chr5:49420854 D5Mit299 1289 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221302730
MGI SNP Detail
Alliance Variant
Chr5:49420861 D5Mit299 1282 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A A G G G A G G A A A G A G A G A G G G A A G G A
rs233175092
MGI SNP Detail
Alliance Variant
Chr5:49420880 D5Mit299 1263 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251396613
MGI SNP Detail
Alliance Variant
Chr5:49420908 D5Mit299 1235 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C T T T C C C T C T C C C C C C C C
rs218993197
MGI SNP Detail
Alliance Variant
Chr5:49421042 D5Mit299 1101 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G G A A A G G G A G A G G G G G G G G
rs241300276
MGI SNP Detail
Alliance Variant
Chr5:49421048 D5Mit299 1095 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs266146388
MGI SNP Detail
Alliance Variant
Chr5:49421078 D5Mit299 1065 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225818920
MGI SNP Detail
Alliance Variant
Chr5:49421124 D5Mit299 1019 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249067130
MGI SNP Detail
Alliance Variant
Chr5:49421133 D5Mit299 1010 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs257175378
MGI SNP Detail
Alliance Variant
Chr5:49421142 D5Mit299 1001 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225982409
MGI SNP Detail
Alliance Variant
Chr5:49421143 D5Mit299 1000 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237372515
MGI SNP Detail
Alliance Variant
Chr5:49421218 D5Mit299 925 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T C T T C C C T C T C T C T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254443993
MGI SNP Detail
Alliance Variant
Chr5:49421257 D5Mit299 886 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227813388
MGI SNP Detail
Alliance Variant
Chr5:49421294 D5Mit299 849 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs37351538
MGI SNP Detail
Alliance Variant
Chr5:49421298 D5Mit299 845 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C A A A A A A C A A A A A A A
rs217764417
MGI SNP Detail
Alliance Variant
Chr5:49421395 D5Mit299 748 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs232072489
MGI SNP Detail
Alliance Variant
Chr5:49421439 D5Mit299 704 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C C C C C C C C C C C C C C C C C C C C C A C C C C A A C C C C C A A A C C C A C A C C C C C C C
rs247639794
MGI SNP Detail
Alliance Variant
Chr5:49421466 D5Mit299 677 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215513719
MGI SNP Detail
Alliance Variant
Chr5:49421503 D5Mit299 640 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233223554
MGI SNP Detail
Alliance Variant
Chr5:49421543 D5Mit299 600 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251428949
MGI SNP Detail
Alliance Variant
Chr5:49421546 D5Mit299 597 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213055554
MGI SNP Detail
Alliance Variant
Chr5:49421549 D5Mit299 594 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236527227
MGI SNP Detail
Alliance Variant
Chr5:49421563 D5Mit299 580 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261013860
MGI SNP Detail
Alliance Variant
Chr5:49421588 D5Mit299 555 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226308213
MGI SNP Detail
Alliance Variant
Chr5:49421614 D5Mit299 529 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246477592
MGI SNP Detail
Alliance Variant
Chr5:49421619 D5Mit299 524 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251220900
MGI SNP Detail
Alliance Variant
Chr5:49421641 D5Mit299 502 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219994409
MGI SNP Detail
Alliance Variant
Chr5:49421689 D5Mit299 454 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237422554
MGI SNP Detail
Alliance Variant
Chr5:49421704 D5Mit299 439 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254557365
MGI SNP Detail
Alliance Variant
Chr5:49421743 D5Mit299 400 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227500974
MGI SNP Detail
Alliance Variant
Chr5:49421747 D5Mit299 396 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250993500
MGI SNP Detail
Alliance Variant
Chr5:49421795 D5Mit299 348 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37018627
MGI SNP Detail
Alliance Variant
Chr5:49421940 D5Mit299 203 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G A A G A G
rs232733303
MGI SNP Detail
Alliance Variant
Chr5:49421984 D5Mit299 159 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs246132242
MGI SNP Detail
Alliance Variant
Chr5:49422022 D5Mit299 121 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215543252
MGI SNP Detail
Alliance Variant
Chr5:49422025 D5Mit299 118 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs226894522
MGI SNP Detail
Alliance Variant
Chr5:49422029 D5Mit299 114 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37529419
MGI SNP Detail
Alliance Variant
Chr5:49422055 D5Mit299 88 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G A A G G G
rs213638886
MGI SNP Detail
Alliance Variant
Chr5:49422071 D5Mit299 72 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36780102
MGI SNP Detail
Alliance Variant
Chr5:49422110 D5Mit299 33 bp proximal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T C T T C C T C C T
rs264330127
MGI SNP Detail
Alliance Variant
Chr5:49422153 D5Mit299 within coordinates of
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586141164
MGI SNP Detail
Alliance Variant
Chr5:49422245 D5Mit299 within coordinates of
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218238372
MGI SNP Detail
Alliance Variant
Chr5:49422285 D5Mit299 29 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233651134
MGI SNP Detail
Alliance Variant
Chr5:49422336 D5Mit299 80 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251251168
MGI SNP Detail
Alliance Variant
Chr5:49422342 D5Mit299 86 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580029100
MGI SNP Detail
Alliance Variant
Chr5:49422346 D5Mit299 90 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220091789
MGI SNP Detail
Alliance Variant
Chr5:49422353 D5Mit299 97 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G G G C C C G C C G G G C G C G C G C C C G G C C G
rs237599929
MGI SNP Detail
Alliance Variant
Chr5:49422354 D5Mit299 98 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248884833
MGI SNP Detail
Alliance Variant
Chr5:49422357 D5Mit299 101 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582450941
MGI SNP Detail
Alliance Variant
Chr5:49422373 D5Mit299 117 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219976406
MGI SNP Detail
Alliance Variant
Chr5:49422374 D5Mit299 118 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248186650
MGI SNP Detail
Alliance Variant
Chr5:49422376 D5Mit299 120 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265869317
MGI SNP Detail
Alliance Variant
Chr5:49422427 D5Mit299 171 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T T A A A T A A T T T A T A T A T A A A T T A A T
rs224721084
MGI SNP Detail
Alliance Variant
Chr5:49422431 D5Mit299 175 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs240200372
MGI SNP Detail
Alliance Variant
Chr5:49422497 D5Mit299 241 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs258068980
MGI SNP Detail
Alliance Variant
Chr5:49422561 D5Mit299 305 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A A C C C C A C C A A A C A C A C A C C C C C C C C
rs585883578
MGI SNP Detail
Alliance Variant
Chr5:49422564 D5Mit299 308 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579712049
MGI SNP Detail
Alliance Variant
Chr5:49422680 D5Mit299 424 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225421611
MGI SNP Detail
Alliance Variant
Chr5:49422709 D5Mit299 453 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245376476
MGI SNP Detail
Alliance Variant
Chr5:49422710 D5Mit299 454 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A A G A A G G G A A A G A G A A A A A A A A
rs262138323
MGI SNP Detail
Alliance Variant
Chr5:49422719 D5Mit299 463 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228641659
MGI SNP Detail
Alliance Variant
Chr5:49422730 D5Mit299 474 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254937314
MGI SNP Detail
Alliance Variant
Chr5:49422737 D5Mit299 481 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218333914
MGI SNP Detail
Alliance Variant
Chr5:49422740 D5Mit299 484 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233772956
MGI SNP Detail
Alliance Variant
Chr5:49422752 D5Mit299 496 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs245418155
MGI SNP Detail
Alliance Variant
Chr5:49422776 D5Mit299 520 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214510914
MGI SNP Detail
Alliance Variant
Chr5:49422779 D5Mit299 523 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231467470
MGI SNP Detail
Alliance Variant
Chr5:49422806 D5Mit299 550 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583290405
MGI SNP Detail
Alliance Variant
Chr5:49422826 D5Mit299 570 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586228736
MGI SNP Detail
Alliance Variant
Chr5:49422842 D5Mit299 586 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580523278
MGI SNP Detail
Alliance Variant
Chr5:49422843 D5Mit299 587 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583695878
MGI SNP Detail
Alliance Variant
Chr5:49422876 D5Mit299 620 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587399109
MGI SNP Detail
Alliance Variant
Chr5:49422883 D5Mit299 627 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584813212
MGI SNP Detail
Alliance Variant
Chr5:49422913 D5Mit299 657 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs586945802
MGI SNP Detail
Alliance Variant
Chr5:49422991 D5Mit299 735 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581106542
MGI SNP Detail
Alliance Variant
Chr5:49422992 D5Mit299 736 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584464639
MGI SNP Detail
Alliance Variant
Chr5:49422995 D5Mit299 739 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261546321
MGI SNP Detail
Alliance Variant
Chr5:49423021 D5Mit299 765 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220325857
MGI SNP Detail
Alliance Variant
Chr5:49423074 D5Mit299 818 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242914654
MGI SNP Detail
Alliance Variant
Chr5:49423095 D5Mit299 839 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs260092206
MGI SNP Detail
Alliance Variant
Chr5:49423099 D5Mit299 843 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs225038954
MGI SNP Detail
Alliance Variant
Chr5:49423106 D5Mit299 850 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240339599
MGI SNP Detail
Alliance Variant
Chr5:49423143 D5Mit299 887 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578362308
MGI SNP Detail
Alliance Variant
Chr5:49423147 D5Mit299 891 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582869890
MGI SNP Detail
Alliance Variant
Chr5:49423167 D5Mit299 911 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258106761
MGI SNP Detail
Alliance Variant
Chr5:49423271 D5Mit299 1015 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219310893
MGI SNP Detail
Alliance Variant
Chr5:49423280 D5Mit299 1024 bp distal
Gm73321 within coordinates of
Kcnip4 Intron
Kcnip4 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 120

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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